| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3183 |
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| Symbol | |
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| ID | 6117502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3905867 |
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| End bp | 3908020 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641634728 |
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| Product | exporter of the RND superfamily protein-like protein |
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| Protein accession | YP_001761549 |
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| Protein GI | 170727523 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGAA AAACTGAGTA TGTGAGCGTG GTATGTTGGA CCGCCTTATG TTTACTCGCC
TCAATAGGGG TCAGCAGGTT AGCTTTAGAT GCTGACTATA GCGCTTATTT TGCAAAAGAC
GATCCTCTTT ACACTGAATT TAAAGATTTT CAGCATGAGT TCTCAAGACA GGATGAACTG
ATTTTGTTGT TAGAGGCTGA ACCTGAAAAT ACGTTTCCTT TAAAAGATGA CTCGATTTCT
CGATTTAAGG CTGGATTGAG TGAGCTAGCA GCCGTTAAGA GGGTAGATGG GTACAATCCA
AATGAGTTTG AGTCAGCGAT GTCATTGGCC CTCTCTCATA AAGCGAAATC AGTTAATATC
GGTTTCATTT CACCTGATGC CAAAGCAATT ATTCTCTCTG TGTCGTTTAA CGTCGAAGCG
ATAAAAGGGA CCAAGGCACT CTTAGAGAGT GTTTCATCTG TTAATCGATA TATCGAACAA
TTTGATACTC ATTTCACTCC GCTATTTCAA GTTTATTATT CCGGAGCATT AGCCCTAAAT
TGGCAATATG CTTCTGTGCT AAAACACGAT TTATCGTGGT TTATTCCCGG CTTAGCAATC
ATGTTTAGTG TGATTTTGCT ACTTGTTGTG AGGGAAAAGA TGTGGCTCTT AGGGATTGCC
ACTTCATCTA TGATAACGAT ATTTCTGACA TTAGGTGTAG CTGGGTGGGG AGGATTCATC
TTAGCGGCAA TTAGCGGATT TATACCTGTG GTCATAGTGA GTTTATGTGT GGCATATGCT
GTTCACCTCT ATTTTGGTTG GCGTAATGCA TTAGATGAAG GAGCCGATGA GCAGCAGGCG
CTGCAGCAAT CATTAAGTAC CAATATTAAG CCACTATTTT GGGGAGCTTT AACTACTGCA
ATGGGCTTCT TTCTACTGGT ATTTAGTCCA TCTCCACCTA TCCAAGATTT TGGTAAGTTG
GTTGCTTTTG CTGTGATGGT TAACTTTTTA GTGAATCTAA CCATACTCCT TCCCATAGCA
AAAAGAGCTA AACCCATGGT CTGTTCACAA AAAGTGAGCA GAGGATTTTT CGCACGTCTT
CAGGTCATCA GTTGGCATTA TAAAACTCTT TTTTTAGGCT CGGGATTACT GCTCTCTTTA
CTGGCTATTT ATAGTGTTTC ATCGCTTAAG TTTGACGATG ATGCAATGAA CTATTTTCCC
GGTTCTAACC TATTTAGTCA GTCAAAATTA AAGATGGAAC AGCACTTTAA TGGCGTGAAC
CAGCTCTATT ATGTGGTTGC GAGTGAAGAG AGAGAAGCTC ACAAAGCCTT TGATGGTGTT
GGAATTGCCC AGCAAGATTA TGTGAGCCGG GTTAACCAAT TTAGCCGATT TTTAAGAAAG
CAGGAGGAGG TGCTGCAGGT ACATTCCATT GTCGATTGGA TCAGGCTTTA TGGCCTTGGA
GCTAATCGTT TAAGTCAGGT ACTCAGCGCG CCTAAGCAAC TCAATGCTCA AGCGAGGCGA
TTGATTAATG CTGAGGCCAG CGCCTCTGTG GTGACAGTGG ATTTGATCCC CATGACAGCA
GCTGAGCTTA TCTCATTTGA GGAAAAGGTA GCTGAATGGA AGCTTCAAAA TGACAGTGAA
ATATCGATCG GGCAGGGGTT AAGTCAAAGT ATGATTTTTG CCCACCTTAG TCTGTCTAAT
GCTAAAACTA TGCTCTACTC CTTTGGTTGT GCTCTGCTTT TTCTACTTTT TATTGTGACT
TTGCTTAAAA GCTCCTTCAA ATTAGGTGGG CTAGCTCTTG CGATGAACTT ACTGCCACTT
ATTTGGGTTT TCGGACTATG GCAGTGGTTG GGAGGTGGTT TGAGTTTGGG TAGTGCTGTG
GTGATGGGAA TGATGCTGGG TATTATTATT GATGACTCAC TTCACCTACT GCTAAAGGTA
GATGAGAGAG ACTGTGGCAA AGGTCTCTCT AAAACATTAA CTTCAGTTAT GCCTGCGGTG
GCGTTTACTA GCCTATTACT GTTTTTTGGT TTTGCATTGG GATTGAGTTC GGACTTTTTC
CCTATTGTTG AACTGAGCTT TCTCTCCATG CTTATTGTGG CTTTTGCTTT CTTGTTTGAT
CTGATCATGC TGCCAATGTT GATGACCCTT ATCGCTGGGA GGGATCATGA TTGA
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| Protein sequence | MARKTEYVSV VCWTALCLLA SIGVSRLALD ADYSAYFAKD DPLYTEFKDF QHEFSRQDEL
ILLLEAEPEN TFPLKDDSIS RFKAGLSELA AVKRVDGYNP NEFESAMSLA LSHKAKSVNI
GFISPDAKAI ILSVSFNVEA IKGTKALLES VSSVNRYIEQ FDTHFTPLFQ VYYSGALALN
WQYASVLKHD LSWFIPGLAI MFSVILLLVV REKMWLLGIA TSSMITIFLT LGVAGWGGFI
LAAISGFIPV VIVSLCVAYA VHLYFGWRNA LDEGADEQQA LQQSLSTNIK PLFWGALTTA
MGFFLLVFSP SPPIQDFGKL VAFAVMVNFL VNLTILLPIA KRAKPMVCSQ KVSRGFFARL
QVISWHYKTL FLGSGLLLSL LAIYSVSSLK FDDDAMNYFP GSNLFSQSKL KMEQHFNGVN
QLYYVVASEE REAHKAFDGV GIAQQDYVSR VNQFSRFLRK QEEVLQVHSI VDWIRLYGLG
ANRLSQVLSA PKQLNAQARR LINAEASASV VTVDLIPMTA AELISFEEKV AEWKLQNDSE
ISIGQGLSQS MIFAHLSLSN AKTMLYSFGC ALLFLLFIVT LLKSSFKLGG LALAMNLLPL
IWVFGLWQWL GGGLSLGSAV VMGMMLGIII DDSLHLLLKV DERDCGKGLS KTLTSVMPAV
AFTSLLLFFG FALGLSSDFF PIVELSFLSM LIVAFAFLFD LIMLPMLMTL IAGRDHD
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