Gene Swoo_3179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3179 
Symbol 
ID6117498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3902688 
End bp3903251 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content45% 
IMG OID641634724 
Producthypothetical protein 
Protein accessionYP_001761545 
Protein GI170727519 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.860412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAGAC AAATTTGCTG CTTACTGCTG CTTTCCACAT TAACTGCATG CACCGCTTCT 
GAGGCTGTTA AGCCAAGCCC TCAACGTACA ACTATGGTGG CCACTGGCGA TCTTGGCTTT
TTATCTACTC AAACTCGACA TTTTGCCTGG CATCCGACAT TAGCCAAAGT GGTGGCCGAC
GAAAGAGTGG AAAGCGATCA GGTTATCGGC AATATGCAGC AAGCTTTAAA GAAAGCGTTG
GAAGCTAAAG GGTATCAACT CGTTTCACGT CAGCAATCAC CTGATTTGTT GGTGGGGTTT
GGTCTGACAT TGAGCTCAGA CATGAGTGAT AGCGAGATAC TACAGAAAAC GGGGTTAGTG
CCCGGATTAT CCACTTTTGG TGTGGATATG AATAAATATG AGAAGGGATC TGTGTTAGTG
GCTTTGTTTG AACCTCAATC TCCAGAGCCT GTTTGGAGAG CATTAGGGCA AGGTTTTACC
GATTTTGAGA GAGATGGTGC TAAGCGTCAA CAGGGGTTTA ATGAGTTTAT TTCTGTGATG
CTGACGGCGA TACCAGCAAT TTAG
 
Protein sequence
MIRQICCLLL LSTLTACTAS EAVKPSPQRT TMVATGDLGF LSTQTRHFAW HPTLAKVVAD 
ERVESDQVIG NMQQALKKAL EAKGYQLVSR QQSPDLLVGF GLTLSSDMSD SEILQKTGLV
PGLSTFGVDM NKYEKGSVLV ALFEPQSPEP VWRALGQGFT DFERDGAKRQ QGFNEFISVM
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