| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3153 |
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| Symbol | |
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| ID | 6117472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3868772 |
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| End bp | 3869623 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634698 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001761519 |
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| Protein GI | 170727493 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.79077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCCAA CTCTCCCCAA AATTGAATGC CACATTAATG TCGACTCATG TGAGGCCAAT
GCCGCTTCCT TACTTGCTAA TAAGAGTGGG TTATCTAAGC AGCAGATCAA ACAAGCCATG
ACCAAAGGGG CGGTGTGGCA CACCCGCAAG CACAATACAT CCCGCCTTAG GCGTGGCAAG
AAATCACTTA AAGTGGGTGA TGAACTCCAC CTATACTATA ACCAAGAGGT GCTTGAACAT
CAGATTGATG ACGCTGAACT CATTGCTGAT ATGGGCCAGT ACAGCCTCTG GTACAAGCCC
TACGGTATGC TATGCCAAGG TTCAAAATGG GGTGACCACA CTACCATCAA CCGCTATTCA
GAGACTCACT TGACTCCAGA TAGACCCGCT TTCATTGTGC ATCGTTTAGA TAGGGCTGCG
ACTGGACTTG TTCTGATCGG GCATAGTAAA AGCATAACGG CAGCATTAGC TAAGCTTTTC
GAACTCAGAG AATTAGATAA ATATTATCAG GTAATTGTTG AAGGCCGATT CAATTCAGGT
AGAGAGGAGG TTGTCACTGT AGATAGTGAT GTTGATAATA AATCAGCCTG TTCACACGCC
AAATTGCTTG AATACGACGC TAAGCAGAAC CGTTCTCTGG TGCAGGTCAA GATCGACTCA
GGACGAAAAC ACCAAATTCG TATCCATATG GCTTCTCTTG GTCATCCTGT CGTTGGTGAC
AGGTTACACG GCATAGCCAG CGGTTCTGAC ATCAATCTGC AGCTGACATC TTGCTATCTC
AAATTTCCCT GCCCTGTCAC AGGCGAAATA AATGAGTTTG AGCTGCCAGA GCGATTACGA
CCTAAGTTGT AA
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| Protein sequence | MSPTLPKIEC HINVDSCEAN AASLLANKSG LSKQQIKQAM TKGAVWHTRK HNTSRLRRGK
KSLKVGDELH LYYNQEVLEH QIDDAELIAD MGQYSLWYKP YGMLCQGSKW GDHTTINRYS
ETHLTPDRPA FIVHRLDRAA TGLVLIGHSK SITAALAKLF ELRELDKYYQ VIVEGRFNSG
REEVVTVDSD VDNKSACSHA KLLEYDAKQN RSLVQVKIDS GRKHQIRIHM ASLGHPVVGD
RLHGIASGSD INLQLTSCYL KFPCPVTGEI NEFELPERLR PKL
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