Gene Swoo_3136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3136 
Symbol 
ID6117455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3847448 
End bp3848050 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content43% 
IMG OID641634681 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001761502 
Protein GI170727476 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.263014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAT TCGAAGATTT ATGCCATTTT AGGACCCCTA GATTAACCGT CTCTAGCTGG 
TGGGAACACG TTAATTGTGG TGTTTCTGAA GTCAAATTAG CCCAAACTGT ATTAGAAACT
TTAACCCCTG GAGTTACAGC GACTTTACCA GAAGGCTGGC AAGACATTAA TCACATTGAA
GATGCCCTTC TCTGGATGAA TGACAGAGCC AGTGAGAGCT GCTTTTTAGT GGTACAGGAG
AGCTCAGATG ATCAAGTTAT CGGCTTTGTA TTTCTGCATG AGTTGGCACA AGAGCTAGAA
GCAATTGCTC AAGGAGCTGA TAACGCTTCT ATTAAAAGTG AGCTTCACCT TGGGTATCTG
TTAGCCGAAA ACTACTGGGG AAAGGGCTAT GCAAGTGAAT TGATCGCAGG TTTAGTTGAG
TGGGCGAAAG CCTCAGGAGA GGTAAAATCC TTTGTGGGCG GGGTCGATAT CGATAATACC
GCCTCCATTA TGGTGATGGA GAAAAATGGT TTTACTTTTC ATCAGTCAGA GGGCAGAAAC
AACACCTTGT TTATGCAGCT GGAGCTCGAT AAGCCCAGCT TAAGTAGGAG TAAATTCAAC
TAA
 
Protein sequence
MNEFEDLCHF RTPRLTVSSW WEHVNCGVSE VKLAQTVLET LTPGVTATLP EGWQDINHIE 
DALLWMNDRA SESCFLVVQE SSDDQVIGFV FLHELAQELE AIAQGADNAS IKSELHLGYL
LAENYWGKGY ASELIAGLVE WAKASGEVKS FVGGVDIDNT ASIMVMEKNG FTFHQSEGRN
NTLFMQLELD KPSLSRSKFN