Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3136 |
Symbol | |
ID | 6117455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3847448 |
End bp | 3848050 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641634681 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001761502 |
Protein GI | 170727476 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.263014 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAAT TCGAAGATTT ATGCCATTTT AGGACCCCTA GATTAACCGT CTCTAGCTGG TGGGAACACG TTAATTGTGG TGTTTCTGAA GTCAAATTAG CCCAAACTGT ATTAGAAACT TTAACCCCTG GAGTTACAGC GACTTTACCA GAAGGCTGGC AAGACATTAA TCACATTGAA GATGCCCTTC TCTGGATGAA TGACAGAGCC AGTGAGAGCT GCTTTTTAGT GGTACAGGAG AGCTCAGATG ATCAAGTTAT CGGCTTTGTA TTTCTGCATG AGTTGGCACA AGAGCTAGAA GCAATTGCTC AAGGAGCTGA TAACGCTTCT ATTAAAAGTG AGCTTCACCT TGGGTATCTG TTAGCCGAAA ACTACTGGGG AAAGGGCTAT GCAAGTGAAT TGATCGCAGG TTTAGTTGAG TGGGCGAAAG CCTCAGGAGA GGTAAAATCC TTTGTGGGCG GGGTCGATAT CGATAATACC GCCTCCATTA TGGTGATGGA GAAAAATGGT TTTACTTTTC ATCAGTCAGA GGGCAGAAAC AACACCTTGT TTATGCAGCT GGAGCTCGAT AAGCCCAGCT TAAGTAGGAG TAAATTCAAC TAA
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Protein sequence | MNEFEDLCHF RTPRLTVSSW WEHVNCGVSE VKLAQTVLET LTPGVTATLP EGWQDINHIE DALLWMNDRA SESCFLVVQE SSDDQVIGFV FLHELAQELE AIAQGADNAS IKSELHLGYL LAENYWGKGY ASELIAGLVE WAKASGEVKS FVGGVDIDNT ASIMVMEKNG FTFHQSEGRN NTLFMQLELD KPSLSRSKFN
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