Gene Swoo_3120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3120 
Symbol 
ID6117439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3822169 
End bp3822765 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content45% 
IMG OID641634665 
Producthypothetical protein 
Protein accessionYP_001761486 
Protein GI170727460 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.148578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000028856 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATATTGA ATCACTTAAT GGGGCTATAC ACTCATCCAA AAGAGGAGTG GCACACAATT 
GAACAGAATC ATGAAGCATT AAAGAGCAGT CTGAGTCATG TGCTTTTAGT AGCACTCATC
CCAGTGATCT GCACCTTTTT CGCTTCAACT GAGATAGGTT GGAACTTAGG CGTTGGCGAC
CCACTCTTCC TCACACAGCA AAGTGCGATG TTAATGTCTG TGGGCATGTA TTTCGGATTA
ATCGCAGGCG TATTTGGCCT TGCATACTTA GCATTTTGGA TGGCAAAAAC TTTCGACGCC
GATCCGAGCT TTACTCAAGC ACTAGAGCTC GCCTCTTACA CAGCGACGCC ACTGTTTATG
GTAGGTTTAG CTGCACTCTA TCCAAGTATT TGGTTTGTAA TGGTTATCGG CCTACTGGGT
TTAACTTACT CCGTTTACCT TCTCTATACC GGCGTACCTA TCATCATGAA TATTCCCGAA
GAGAAAGGCT TTATCTACGC AAGTTCAGTT GTCACAGCAG GCTTAGTACT GTTAGTCGCC
TTAATGGCGT CAAGTGTGAT TTTATGGAGC ATGGGCTTAG GCCCAATCCA GCAATAA
 
Protein sequence
MILNHLMGLY THPKEEWHTI EQNHEALKSS LSHVLLVALI PVICTFFAST EIGWNLGVGD 
PLFLTQQSAM LMSVGMYFGL IAGVFGLAYL AFWMAKTFDA DPSFTQALEL ASYTATPLFM
VGLAALYPSI WFVMVIGLLG LTYSVYLLYT GVPIIMNIPE EKGFIYASSV VTAGLVLLVA
LMASSVILWS MGLGPIQQ