Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3120 |
Symbol | |
ID | 6117439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3822169 |
End bp | 3822765 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641634665 |
Product | hypothetical protein |
Protein accession | YP_001761486 |
Protein GI | 170727460 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.148578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000028856 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATATTGA ATCACTTAAT GGGGCTATAC ACTCATCCAA AAGAGGAGTG GCACACAATT GAACAGAATC ATGAAGCATT AAAGAGCAGT CTGAGTCATG TGCTTTTAGT AGCACTCATC CCAGTGATCT GCACCTTTTT CGCTTCAACT GAGATAGGTT GGAACTTAGG CGTTGGCGAC CCACTCTTCC TCACACAGCA AAGTGCGATG TTAATGTCTG TGGGCATGTA TTTCGGATTA ATCGCAGGCG TATTTGGCCT TGCATACTTA GCATTTTGGA TGGCAAAAAC TTTCGACGCC GATCCGAGCT TTACTCAAGC ACTAGAGCTC GCCTCTTACA CAGCGACGCC ACTGTTTATG GTAGGTTTAG CTGCACTCTA TCCAAGTATT TGGTTTGTAA TGGTTATCGG CCTACTGGGT TTAACTTACT CCGTTTACCT TCTCTATACC GGCGTACCTA TCATCATGAA TATTCCCGAA GAGAAAGGCT TTATCTACGC AAGTTCAGTT GTCACAGCAG GCTTAGTACT GTTAGTCGCC TTAATGGCGT CAAGTGTGAT TTTATGGAGC ATGGGCTTAG GCCCAATCCA GCAATAA
|
Protein sequence | MILNHLMGLY THPKEEWHTI EQNHEALKSS LSHVLLVALI PVICTFFAST EIGWNLGVGD PLFLTQQSAM LMSVGMYFGL IAGVFGLAYL AFWMAKTFDA DPSFTQALEL ASYTATPLFM VGLAALYPSI WFVMVIGLLG LTYSVYLLYT GVPIIMNIPE EKGFIYASSV VTAGLVLLVA LMASSVILWS MGLGPIQQ
|
| |