| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3078 |
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| Symbol | |
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| ID | 6117393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3768482 |
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| End bp | 3769837 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641634620 |
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| Product | MotA/TolQ/ExbB proton channel |
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| Protein accession | YP_001761444 |
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| Protein GI | 170727418 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00501831 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000206592 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAGT TTATCTCTAC AGCTATCGTT GCTGCAACTC TATCTCTAAC TGCCGGTATG
GTAAGTGCTG CCGATGCTCC TAAAAGCATT GATCAGCTTC TTAAACAGGT TCAATCTGAA
CGTGCTACTG CAGCTAAGAC AAATAAAAAT CGTGAAGCTG AGTTTCGTGC TGAGCGTGGT
GATAAAGCTG CGTTACTTAA GCGTGAAAAA GCCGCTCTTG CTGCTGAAGA ACAGCGCGGT
AAAGATCTGA CTCAGGCTTT TGCTGATAAC GAGCGTAAAA TTGCTCAGTT AGAAGAAGAT
CGTAAAATTG CTCAAGGTGA TTTGGGTGAG ATGTTTGGTG TTGTTAAAGG CGAGGCTGGT
GATTTTGCTG GTAAGCTAGC TTCATCTAAC GTGACTGCTC AATACCCTGG TCGTGATAAG
TTTATCGCTG AACTTGGTGC TCGTAAGGAG CTTCCAAAAA TCGAAGAGCT TGAAAAGTTC
TGGGAAGACC AACTTTTCGA GATGGCTGAA TCTGGAAAAG TCGTTACTTT TGATGGTTCA
GTTACCGGTC TTGATGGTGG TGTTCATAAC ACTACTGTGA CACGTGTTGG TGCTTATAAC
CTACTTGCTG ATGGTAAGTA TGTTGTGTAT AACGCAGATC TTGGTCTAAT TCAGGAGCTT
TCACAGCAAC CTGGTGGCGA GCAAGTATCT AGTGTTAAGA ACTTCACTTC TACCACTTCT
GGTTATGAAA AGCTTTTTGT TGACCCTGCA CGTGGTGTTT TATTAAGTGT ATTCACTCAG
AAGGCAACGA TTGAAGAGCG TATCGAAGCA GGTGGACCAA TTGGTTACAT CATTATCGGT
CTACTTATTC TCGGTGCTCT AATCTTTATC GAGCGTCTAA TTACGCTTTA TCTTGTAGGT
GCTAAAGTTA AGTCTCAGCG TAAGAATCTT GAAGAGCCAG GTAATAACCC ACTTGGACGT
ATTCTTAAGA CTTATCAAGA AAACAAAGAT GTTGATGTTG AGACATTAGA GTTGAAACTT
GATGAAGCTA TTCTTAAAGA GACGCCTGCA CTTGAAACTC GTATCTCTAT CATCAAGGTT
CTTGCAGCTA TCGCACCTAT GATGGGTCTA CTTGGTACAG TAACGGGTAT GATTGCAACC
TTCCAAACGA TTCAGTTATT CGGTACAGGT GATCCACGTC TAATGGCTGG TGGTATCTCT
ATGGCACTGA TGACGACTGT TCAAGGTCTA GTTGCAGCGC TTCCATTGAT GCTTATGCAT
GCGATTGTTA TTGCTCGTAG CAAGTCAGTT GTTCAGGTTC TTGAAGAGCA GAGTGCTGGT
ATTGTTGCTG CTCACGCTGA GAAGAGGAAC GCATAA
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| Protein sequence | MKKFISTAIV AATLSLTAGM VSAADAPKSI DQLLKQVQSE RATAAKTNKN REAEFRAERG
DKAALLKREK AALAAEEQRG KDLTQAFADN ERKIAQLEED RKIAQGDLGE MFGVVKGEAG
DFAGKLASSN VTAQYPGRDK FIAELGARKE LPKIEELEKF WEDQLFEMAE SGKVVTFDGS
VTGLDGGVHN TTVTRVGAYN LLADGKYVVY NADLGLIQEL SQQPGGEQVS SVKNFTSTTS
GYEKLFVDPA RGVLLSVFTQ KATIEERIEA GGPIGYIIIG LLILGALIFI ERLITLYLVG
AKVKSQRKNL EEPGNNPLGR ILKTYQENKD VDVETLELKL DEAILKETPA LETRISIIKV
LAAIAPMMGL LGTVTGMIAT FQTIQLFGTG DPRLMAGGIS MALMTTVQGL VAALPLMLMH
AIVIARSKSV VQVLEEQSAG IVAAHAEKRN A
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