| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3053 |
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| Symbol | |
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| ID | 6117368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3739139 |
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| End bp | 3740482 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634595 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001761419 |
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| Protein GI | 170727393 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.643926 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.011472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCAATTTA CCGAATTTTC CCTGGACGCA CGCCTGTTAC AAAGTCTCAG TCATATGGGT
ATCACTACAC CTACAGAGAT CCAGGAGATG GCAATCCCTG TCGGTCTGTC AGGAAAAGAC
CTGATGGCGT CATCAAAAAC AGGTTCAGGT AAAACCTTAG CGTTTTTACT GCCGGCAATG
CAGAGGATCA TTTCAACTAA GGCGCTCAGT AAACGTGACC CAAGAGTCCT CATTTTGCTG
CCGACCCGAG AGCTTGCCAA TCAGGTCTAT AGCCAACTTC GTCTGTTGGT GGCTAACACA
CAATATAAGG CGCTTAAAAT TCTTGGTGGT GAGAATTTCA ATGACCAAGC TAAAGCGTTA
GCCCGAGATC CACACTTTGT GGTTGCAACA CCAGGTCGCC TTGCCGATCA CTTAGCGCAG
CATCACTTTC ACTTAAACGG CTTGGAGCTG CTTATCCTTG ATGAAGCAGA CCGTATGCTG
GACTTAGGTT TTGCCGACCA ACTTAAAGCG ATCAACGCCG CAGCGGATCA TAAACGTCGT
CAGACATTGA TGTTCTCAGC GACCCTGAAT CACAATGAGA TTAATGAGAT TGCTTCGGAG
TTGCTAAAAG ATCCAAAGCA TGTGGCTGTA GGTGCAAGTA ATATTGAAAA CCAAGATATT
ACCCAGAAAA TCTACCTGTG CGATCACTTA GACCATAAAG AAGCCCTATT ACAGAGTATT
CTTAAGCGCG GTGAGCAGAA ACAAGTCATC ATCTTTACCG CCACTCGCCA AGATACCGAT
AGATTAGCGA AGAAATTGGC CGAAGAGGGC TTTAATACCG CCTCACTCAG TGGCGATCTA
AATCAAAGCG CTCGTAATCA GATAATGGAT CAATTTAGCC GTGGCATGCA GGATATTCTG
GTCACCACAG ATGTCGCATC TCGTGGTCTT GATCTGCTTA ATGTTTCTTT GGTGATCAAC
TTCGATATGC CCAAGTTTGC CGAAGAGTAT GTACACAGAA TTGGCCGTAC AGCCCGAGCA
GGAGCTAAAG GCGACGCTAT CTCATTCGTC GGCCCTAAAG ATTGGGTTAA CTTTAAACAG
GTTCAGCAGT TCTTAAGTAA AACTTTCGAA TTCAGTACGA TAGAAGGCCT TAAAGCTAAG
TTTACCGGCC TGAAAGACAA ACCTAAAGCG GGTAAAAAAT CGGCTGCTAA GCCGAAACGA
ACTAAAGCCT CTACGAAGCA GAAAAATGCT AAACCTAAGG CTAAAGTCGT TAAAGATAAA
CGCTTTATCA CAGGTATCGA TATTGGTGAT GCGCCAATGC TAAGAAAACC TAAATCTAAG
CTTCAGGATA CACCAGAAGA TTAA
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| Protein sequence | MQFTEFSLDA RLLQSLSHMG ITTPTEIQEM AIPVGLSGKD LMASSKTGSG KTLAFLLPAM
QRIISTKALS KRDPRVLILL PTRELANQVY SQLRLLVANT QYKALKILGG ENFNDQAKAL
ARDPHFVVAT PGRLADHLAQ HHFHLNGLEL LILDEADRML DLGFADQLKA INAAADHKRR
QTLMFSATLN HNEINEIASE LLKDPKHVAV GASNIENQDI TQKIYLCDHL DHKEALLQSI
LKRGEQKQVI IFTATRQDTD RLAKKLAEEG FNTASLSGDL NQSARNQIMD QFSRGMQDIL
VTTDVASRGL DLLNVSLVIN FDMPKFAEEY VHRIGRTARA GAKGDAISFV GPKDWVNFKQ
VQQFLSKTFE FSTIEGLKAK FTGLKDKPKA GKKSAAKPKR TKASTKQKNA KPKAKVVKDK
RFITGIDIGD APMLRKPKSK LQDTPED
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