Gene Swoo_3040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3040 
Symbol 
ID6117355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3724882 
End bp3725268 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content39% 
IMG OID641634582 
Productrhodanese domain-containing protein 
Protein accessionYP_001761406 
Protein GI170727380 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00420401 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0677639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATAA TCAATAAAGG ATTTAAAGTA TCAAGTTATT TTATTGTCAC GCTATTACTC 
TTGCTATCAA TCAGTCAAAG CTCATTAGCA GCAGACAAAA ATCCCCAAAC AGCTTGGAGT
AAAATAGATG CAGGCGCCTT GGTTGTAGAT GTGCGCACAG CCCAAGAGTT TGCAAGTGGG
CACTTAGATA ACGCCATCAA TATCCCGTTC GAAGCAATTG CCGAAGGGCT TAATAAACTC
AATATTGATA AAGAGAGAGA GATAGTACTT TATTGCAGAA GTGGACGTCG TAGTGGCATA
GCCAACGATA CCTTGATCGA AAAAGGATAT ACCAACACCT ATAATGGTGG TGGTTATAAG
ATGTTAAGCA ACCACAAAAA ACAATAA
 
Protein sequence
MNIINKGFKV SSYFIVTLLL LLSISQSSLA ADKNPQTAWS KIDAGALVVD VRTAQEFASG 
HLDNAINIPF EAIAEGLNKL NIDKEREIVL YCRSGRRSGI ANDTLIEKGY TNTYNGGGYK
MLSNHKKQ