Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3039 |
Symbol | |
ID | 6117354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3723953 |
End bp | 3724669 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641634581 |
Product | hypothetical protein |
Protein accession | YP_001761405 |
Protein GI | 170727379 |
COG category | [S] Function unknown |
COG ID | [COG2859] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0172868 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.01799 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAAAA ATAACACCTT AGCGGCCTTT ATTCTTGGTG GTTTAATGAG TATTGGACTA GTGCTCTCAG CCCAAGGGAT AGGTAACAGC TTAATAAAAA TGAAATCCAT GGAGCGGACT GTCACCGTTA AGGGGCTGGC AGAGAAAGAG GTTAAAGCCA ATATCGCCAT CTGGCCAATA CGTTTTACCG AGGTCGATAA TGATCTCAAT GCTTTATATG CTTCAGTACA GGATAAGACA GATAAAGTCG TCGGCTTCCT GACTGCTCAA GGGTTTACCT CTGATGAGAT CTCAACCTCA CTGCCCTCTA TTGAGGACAG ACAAGCTCAA GGTTATGTAG ACCCCAATGT AAAGTACCGA TATGCCGCGA AAGTGACTAT CTCTTTATAT ACTAAGCGAG TTGATCTGCT CCTCAGTAGT CAAAAGAGCA TGCTTGATCT TACCAAGGAG GGGATTGCCA TCTCCAATCA GGACTATAAC AGCCGCACCG AGTTTCTTTT TACAGAGCTC AACAAGGTCA AACCTGAGAT GGTTCAATCA GCAACACAAA ATGCAAGAGA AGTGGCCACT AAATTTGCCA GTGACTCAGA CTCCAGGCTG GGAAAAATCA AACAAGCCAG TCAAGGACAG TTTAGTATCT CAGATAGAGA CAGTAATACT CCCTACATTA AACGAGTCCG TATTGTCTCT ACACTGACCT ATTACTTAGA CGATTAG
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Protein sequence | MLKNNTLAAF ILGGLMSIGL VLSAQGIGNS LIKMKSMERT VTVKGLAEKE VKANIAIWPI RFTEVDNDLN ALYASVQDKT DKVVGFLTAQ GFTSDEISTS LPSIEDRQAQ GYVDPNVKYR YAAKVTISLY TKRVDLLLSS QKSMLDLTKE GIAISNQDYN SRTEFLFTEL NKVKPEMVQS ATQNAREVAT KFASDSDSRL GKIKQASQGQ FSISDRDSNT PYIKRVRIVS TLTYYLDD
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