Gene Swoo_3039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3039 
Symbol 
ID6117354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3723953 
End bp3724669 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content43% 
IMG OID641634581 
Producthypothetical protein 
Protein accessionYP_001761405 
Protein GI170727379 
COG category[S] Function unknown 
COG ID[COG2859] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0172868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.01799 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAAA ATAACACCTT AGCGGCCTTT ATTCTTGGTG GTTTAATGAG TATTGGACTA 
GTGCTCTCAG CCCAAGGGAT AGGTAACAGC TTAATAAAAA TGAAATCCAT GGAGCGGACT
GTCACCGTTA AGGGGCTGGC AGAGAAAGAG GTTAAAGCCA ATATCGCCAT CTGGCCAATA
CGTTTTACCG AGGTCGATAA TGATCTCAAT GCTTTATATG CTTCAGTACA GGATAAGACA
GATAAAGTCG TCGGCTTCCT GACTGCTCAA GGGTTTACCT CTGATGAGAT CTCAACCTCA
CTGCCCTCTA TTGAGGACAG ACAAGCTCAA GGTTATGTAG ACCCCAATGT AAAGTACCGA
TATGCCGCGA AAGTGACTAT CTCTTTATAT ACTAAGCGAG TTGATCTGCT CCTCAGTAGT
CAAAAGAGCA TGCTTGATCT TACCAAGGAG GGGATTGCCA TCTCCAATCA GGACTATAAC
AGCCGCACCG AGTTTCTTTT TACAGAGCTC AACAAGGTCA AACCTGAGAT GGTTCAATCA
GCAACACAAA ATGCAAGAGA AGTGGCCACT AAATTTGCCA GTGACTCAGA CTCCAGGCTG
GGAAAAATCA AACAAGCCAG TCAAGGACAG TTTAGTATCT CAGATAGAGA CAGTAATACT
CCCTACATTA AACGAGTCCG TATTGTCTCT ACACTGACCT ATTACTTAGA CGATTAG
 
Protein sequence
MLKNNTLAAF ILGGLMSIGL VLSAQGIGNS LIKMKSMERT VTVKGLAEKE VKANIAIWPI 
RFTEVDNDLN ALYASVQDKT DKVVGFLTAQ GFTSDEISTS LPSIEDRQAQ GYVDPNVKYR
YAAKVTISLY TKRVDLLLSS QKSMLDLTKE GIAISNQDYN SRTEFLFTEL NKVKPEMVQS
ATQNAREVAT KFASDSDSRL GKIKQASQGQ FSISDRDSNT PYIKRVRIVS TLTYYLDD