| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2990 |
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| Symbol | |
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| ID | 6117305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3664037 |
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| End bp | 3664828 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641634532 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001761356 |
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| Protein GI | 170727330 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.604366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.133749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTCGTT GTTTTAAAAG CGGATTTTTT TCTATTTTTT TATCCCTTCT ATTGATATGT
CAATCGATTG CCGATGAAAG TGTTGAGTTA CGTCTGCTGA CTGAGCCATG GGCTCCTGTT
TCTTACGATG ATGCAGGCAT TGCTTCTGGT TTTGCTGTTG AACTTGTCAA TGAGTTACAG
CGGATTATGG GGACTGAACT GGAGATTGAG GTGCTACCTT GGGCGAGAGC TTTATCGATT
GCTAACTCTT TGCCAAATGT GGTGTTGTTT GCTACCTCTG TCGATGAAGA ACGACGTAAA
AACTTTGATT TTGTTGGGCC TATTATTACC AGTAAAATTT CACTCTATGC AAAAGCCAAT
GATCATATTG AAATTAACAG TCTTGAAGAG TTAAACCATG CGGGCAGCAT AGGTACCTAT
CGAAGTGCTA TCGGTTTAGA GATGTTAAAA GAGTTAGGGC TAACACAGCT TTTGGTATCA
AGCTTCCCTC ACCAGTCAGC TAAACAGTTG ATTAAGGGGC GAGTAAGGTT TTGGTGTCAG
GCTGATATTG CAGTAGCAAG CTTACTAACC AAAATTGGCG CTAATATCGA TTCGGTTAAA
CCTGTTTTTG TCCTCTCGGA GATAGAGCTG TATCTTGCTT TTTCAAAAGG GACTGAATTA
GAGGTGATTA AGCAGTGGCA AAGTGCGCTG GCGTACTATA AAGCTTCAGG TAAATTCAAA
CGCCTCTATT ATAAGTGGTT TGGCGACTTA CCGGTTCCAG AAAGAGTTGA GCTTATCAGG
CGAGTAGAGT GA
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| Protein sequence | MGRCFKSGFF SIFLSLLLIC QSIADESVEL RLLTEPWAPV SYDDAGIASG FAVELVNELQ
RIMGTELEIE VLPWARALSI ANSLPNVVLF ATSVDEERRK NFDFVGPIIT SKISLYAKAN
DHIEINSLEE LNHAGSIGTY RSAIGLEMLK ELGLTQLLVS SFPHQSAKQL IKGRVRFWCQ
ADIAVASLLT KIGANIDSVK PVFVLSEIEL YLAFSKGTEL EVIKQWQSAL AYYKASGKFK
RLYYKWFGDL PVPERVELIR RVE
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