| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2916 |
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| Symbol | |
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| ID | 6117231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3565360 |
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| End bp | 3566583 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641634460 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001761284 |
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| Protein GI | 170727258 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.511307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAGC TCGACCCCTA TTTCGGCGAA TATGGCGGCA TGTATGTGCC TCAAATTTTA
ATGCCAGCAC TCAAGCAACT TGAAACAGCA TTTGTTGAAG CTCAGGAAGA TGAAGCATTT
AAAACTGAAT TTAACGATCT GCTAAAAAAT TACGCTGGCC GTCCTACAGC GCTCACCTTA
ACTCGTAATT TAAGTCCTAA CCCTTTAGTG AAAATTTACC TAAAGCGTGA AGATCTCCTT
CATGGTGGCG CTCACAAAAC AAACCAAGTA TTAGGTCAAG CTCTGCTTGC AAAGCGTATG
GGTAAGAAAG AGATCATCGC CGAAACTGGT GCTGGTCAAC ATGGAGTTGC AACCGCTCTT
GCTTGTGCGC TTCTTGACTT AAAATGTAAG GTTTACATGG GCGCAAAAGA TGTTGAGCGC
CAATCGCCTA ATGTGTTCAG AATGAAGCTG ATGGGTGCTG AAGTGATCCC AGTAACATCA
GGCTCCTCCA CCCTAAAAGA TGCCTGTAAT GAGGCGATGC GCGACTGGTC AGGTAGCTAT
GATAAGGCCC ATTATCTACT GGGAACCGCA GCAGGACCAC ACCCTTTCCC GACGATTGTT
CGCGAATTTC AGAGAATGAT TGGTGCTGAA ACGAAGAAGC AGATTCTAGA GCGCGAGGGT
CGTCTACCTG ATGCGGTTAT CGCCTGCGTC GGCGGTGGTT CTAATGCCAT CGGCATGTTT
GCCGACTTTA TTGATGAAGA GTCTGTCAAA TTAATTGGTG TTGAACCTGC AGGTTTAGGT
ATTGATACCC CAATGCACGG CGCGCCACTT AAGCATGGTA AAACCGGAAT ATTCTTCGGT
ATGAAAGCCC CATTGATGCA AGATAGGGAG GGACAAATTG AGGAGTCCTA CTCAATCTCA
GCAGGCCTCG ACTTCCCATC AGTGGGTCCA CAACATGCCC ATTTGGCTGC CACAGGCCGT
GCAACCTATG AGTCGGCCAC CGATGATGAA GCATTAGAAG CGTTCCAGCT ACTAGCACGA
AGTGAGGGGA TCATCCCTGC ATTAGAGTCT GCCCATGCAC TCGCTTACGC CGTCAAAATG
GCAAAAGCCG CAACACAGGA GACCATATTG GTGGTGAACT TATCGGGTCG AGGCGATAAA
GATATCTTTA CCGTTGCTGA TATTTTAGAG GAGCGCGAGA GGTCACAAAC GGGCCAGCAA
AAAGAGGAGA GTGGCAATGA CTGA
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| Protein sequence | MTKLDPYFGE YGGMYVPQIL MPALKQLETA FVEAQEDEAF KTEFNDLLKN YAGRPTALTL
TRNLSPNPLV KIYLKREDLL HGGAHKTNQV LGQALLAKRM GKKEIIAETG AGQHGVATAL
ACALLDLKCK VYMGAKDVER QSPNVFRMKL MGAEVIPVTS GSSTLKDACN EAMRDWSGSY
DKAHYLLGTA AGPHPFPTIV REFQRMIGAE TKKQILEREG RLPDAVIACV GGGSNAIGMF
ADFIDEESVK LIGVEPAGLG IDTPMHGAPL KHGKTGIFFG MKAPLMQDRE GQIEESYSIS
AGLDFPSVGP QHAHLAATGR ATYESATDDE ALEAFQLLAR SEGIIPALES AHALAYAVKM
AKAATQETIL VVNLSGRGDK DIFTVADILE ERERSQTGQQ KEESGND
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