Gene Swoo_2868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2868 
Symbol 
ID6117183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3505454 
End bp3506071 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content45% 
IMG OID641634414 
ProductNADH-ubiquinone/plastoquinone oxidoreductase chain 6 
Protein accessionYP_001761238 
Protein GI170727212 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.363352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0299153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAGA TAATCTTTAT TACTACAGCT ATCGTCTGTG TCATCTCAGC TTTATTAACC 
GTCACAGCCC ATAACGCAGT GCATGCTTTG CTCTATCTGG TCACTATGAT GATCGCCATC
GCACTTATTT TCTTCCTATT TGGCTCTCCC TTTGCTGCGG CGCTGCAGAT CATCGTTTAT
GCAGGCGCCG TCATGGTATT GTTTGTTTTT GTCACCATGA TGCTGCATCA AGGCGAGCAA
AGTATCATAG ATGAGAAGAC ACTATTTAGC CTCAAAACTG CCAAGGGCCC TCTTTTACTG
GCTGTAATAC TGGTCATTGA GCTATTACTG ATCGGCATAA CACCGTTAGA TAATTCCCCT
TCACTGACCC CTTTAAATAC GGTTAACAGT GAAAGCCAGC AACTTTCAAC GAGCAGCAAA
ACGCCCTCAC TCACCTCAGT AAAATCACTC GCGAAACAGT TATATGGTCC CTATAAACTG
CTGGTCATCA TCGCTGCAAT GTTACTGCTC TCCTCCCTAA TTGCAGCCAT ACATATTGCG
AGAAAGAGTT CTAGGCTTAC CGAAAACTCG CCTGTGAATG GGGACTCAGA GTCTAAAGCG
TCGGAGGCAG CCCCATGA
 
Protein sequence
MIEIIFITTA IVCVISALLT VTAHNAVHAL LYLVTMMIAI ALIFFLFGSP FAAALQIIVY 
AGAVMVLFVF VTMMLHQGEQ SIIDEKTLFS LKTAKGPLLL AVILVIELLL IGITPLDNSP
SLTPLNTVNS ESQQLSTSSK TPSLTSVKSL AKQLYGPYKL LVIIAAMLLL SSLIAAIHIA
RKSSRLTENS PVNGDSESKA SEAAP