| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2828 |
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| Symbol | |
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| ID | 6117143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3455968 |
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| End bp | 3457170 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641634374 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001761198 |
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| Protein GI | 170727172 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.238138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.24996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGTTAG CTTTACTAAA CTTTGTAGAT TCATATAGTT TGTTGGCTAA GGGTTATGGC
AAAGTGACCT ATATCAACCT TTTATCTCTG CGCTACCCCA AAGATCCTGA GCGGGAGTTG
AACTACTTAG AGCGAGTTCA TCGCTTTTTT AGTTACTCCA TCTCCAATAT GCTTGGCTTG
ATTTTTGGTG CGAGTCTTAT CTCAGTTATT CTCTATTACT ACGGTGCGAT GATTGGACAG
ATCCAACTTC TATTTGCATG TACCGCTGTG GTTGCCACAT GTGTCTATTT AATCTCTAGA
TACGTTGATA AACATAAACT AGAAGGCGAA TTGTTGGCAA ACTTACTGAT CTCTAGAGTC
ACTTTAGGTT GTGTTATAGG AGTCTTATAT GGCGTCGCCG TTTTTCTGCT ACCTAAGCCT
ATCGAAGAAG CCAGTGTGCT TTTTCTTCTC TGTATCTACC TCGCCTCCAT TGCGGTGGCT
ATTTTTCAGT ACTCTGTGAT ACCGACTTAT TACATCTTAT TTAATTTCAG TATGTTAATC
CCTGTTATGT TTTACTTCGT TATTTTTCCA AGTACCTTTG GTTATCTGAT GATTTTAGTA
CTGATATCTG GCTCACTTAT GTTCATATCG AAAGGGTTTA AGATCTCTAA AAACGAGATA
CATTCAATCA CTGTTAATTT AAGGCTGCAG GCTGAGGTGG CTGAACATGT ACTGACTAGA
CAGAAACTAC AGGAGATGGC GCTGTACGAT AATCTGACGA AGGTGGCTAA TCGCCACCTT
TTTGAAGAGA GTGCCGAGAA CTCTCTTGAA CGAGCTAAAG AGCAAAAACA ATCCATGGCA
CTGCTCTATA TCGATCTTAA TAACTTTAAA ACTATCAATG ATCGTTTCGG TCATGAGGTG
GGCGATAAGG TGTTAATCGA AGCTGCCAAC AGGGTTAAAA CTAAGATACG ACATACGGAT
CTTGTTGCTA GGTTTGGCGG TGATGAGTTT GTGGTTGTGC TTGAAAATTA CAATCTAGAT
GTAGTGAGAG TCGACCTAAT TGATGTCATT CGCGGTGTGT TAAATGAAGA TATATTGATA
GAAGGTCAGC TGCTTGAGCT GAGGGCCAGT ATAGGTGTTT CTATTTTCCC CAATGATGGC
AGTAGCTTGA GAGACTTACT TCATAATGCT GACACCCATA TGTATAACCA GAAGAAACAC
TAA
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| Protein sequence | MRLALLNFVD SYSLLAKGYG KVTYINLLSL RYPKDPEREL NYLERVHRFF SYSISNMLGL
IFGASLISVI LYYYGAMIGQ IQLLFACTAV VATCVYLISR YVDKHKLEGE LLANLLISRV
TLGCVIGVLY GVAVFLLPKP IEEASVLFLL CIYLASIAVA IFQYSVIPTY YILFNFSMLI
PVMFYFVIFP STFGYLMILV LISGSLMFIS KGFKISKNEI HSITVNLRLQ AEVAEHVLTR
QKLQEMALYD NLTKVANRHL FEESAENSLE RAKEQKQSMA LLYIDLNNFK TINDRFGHEV
GDKVLIEAAN RVKTKIRHTD LVARFGGDEF VVVLENYNLD VVRVDLIDVI RGVLNEDILI
EGQLLELRAS IGVSIFPNDG SSLRDLLHNA DTHMYNQKKH
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