Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2811 |
Symbol | |
ID | 6117120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3430304 |
End bp | 3430984 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641634351 |
Product | hypothetical protein |
Protein accession | YP_001761181 |
Protein GI | 170727155 |
COG category | [S] Function unknown |
COG ID | [COG3110] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.255962 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACC CTCTTCTCAC GCTCGCCCTT ACTGGGATCA TTCCTCTCAT ATTTATCGCT CCTGCATTCG CTGGCAATCA CTTAACACTC CCCAAGTCCG CAGAACTATT AGTTGTTAAT GGTGCTGAAA TCTCAAAATC ATCACAAGTT TCCCTTGAAA ATGGTACCAA TCAAATTGTG TTTAAATACC ACACAAAATA TAGATCCCAA GGACAAGATA AACGATTTAG CTCTGAAGCA ATTGTCTTAA GTTTTACCGC AGAAGATAAA GCACTTACTT TAGTCTTACC CTCACTAAGA TCTAGCAGTC AAAGTGATAA ATTTAACCTA AACCCTCAAG TCACAATCGA AGACATTCAA GGGGATGCAC TGCCTATTCA AACAGGAGTA CTTCGTAAAG AGGGGATCCA GCTTGGACGA AACTATAGTG AAGAGGTGCT GAACTACAAT CAAACAGATG CTCCTGCCGC CCTAAAGGAG TTAGCGCCCA CCAGTGTCGT TATCTCAATC CCTCCTACGA GTCCTCAACT AGAATTAGAG GTCTTAAAAG ATAAGGCTCC TGAGTTAAAA GATCAGAAAA ATATCAGTAG AATGCTTGAT TTTTGGTATA GCCAAGCAGA TGAAACAACT CGTAATTCGT TTAAAGAAAA AATCAATAGA GCTGACACAG AAACACATTA A
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Protein sequence | MKHPLLTLAL TGIIPLIFIA PAFAGNHLTL PKSAELLVVN GAEISKSSQV SLENGTNQIV FKYHTKYRSQ GQDKRFSSEA IVLSFTAEDK ALTLVLPSLR SSSQSDKFNL NPQVTIEDIQ GDALPIQTGV LRKEGIQLGR NYSEEVLNYN QTDAPAALKE LAPTSVVISI PPTSPQLELE VLKDKAPELK DQKNISRMLD FWYSQADETT RNSFKEKINR ADTETH
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