Gene Swoo_2811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2811 
Symbol 
ID6117120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3430304 
End bp3430984 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content40% 
IMG OID641634351 
Producthypothetical protein 
Protein accessionYP_001761181 
Protein GI170727155 
COG category[S] Function unknown 
COG ID[COG3110] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.255962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACC CTCTTCTCAC GCTCGCCCTT ACTGGGATCA TTCCTCTCAT ATTTATCGCT 
CCTGCATTCG CTGGCAATCA CTTAACACTC CCCAAGTCCG CAGAACTATT AGTTGTTAAT
GGTGCTGAAA TCTCAAAATC ATCACAAGTT TCCCTTGAAA ATGGTACCAA TCAAATTGTG
TTTAAATACC ACACAAAATA TAGATCCCAA GGACAAGATA AACGATTTAG CTCTGAAGCA
ATTGTCTTAA GTTTTACCGC AGAAGATAAA GCACTTACTT TAGTCTTACC CTCACTAAGA
TCTAGCAGTC AAAGTGATAA ATTTAACCTA AACCCTCAAG TCACAATCGA AGACATTCAA
GGGGATGCAC TGCCTATTCA AACAGGAGTA CTTCGTAAAG AGGGGATCCA GCTTGGACGA
AACTATAGTG AAGAGGTGCT GAACTACAAT CAAACAGATG CTCCTGCCGC CCTAAAGGAG
TTAGCGCCCA CCAGTGTCGT TATCTCAATC CCTCCTACGA GTCCTCAACT AGAATTAGAG
GTCTTAAAAG ATAAGGCTCC TGAGTTAAAA GATCAGAAAA ATATCAGTAG AATGCTTGAT
TTTTGGTATA GCCAAGCAGA TGAAACAACT CGTAATTCGT TTAAAGAAAA AATCAATAGA
GCTGACACAG AAACACATTA A
 
Protein sequence
MKHPLLTLAL TGIIPLIFIA PAFAGNHLTL PKSAELLVVN GAEISKSSQV SLENGTNQIV 
FKYHTKYRSQ GQDKRFSSEA IVLSFTAEDK ALTLVLPSLR SSSQSDKFNL NPQVTIEDIQ
GDALPIQTGV LRKEGIQLGR NYSEEVLNYN QTDAPAALKE LAPTSVVISI PPTSPQLELE
VLKDKAPELK DQKNISRMLD FWYSQADETT RNSFKEKINR ADTETH