Gene Swoo_2716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2716 
Symbol 
ID6117015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3323481 
End bp3324293 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content42% 
IMG OID641634247 
Producthypothetical protein 
Protein accessionYP_001761087 
Protein GI170727061 
COG category[S] Function unknown 
COG ID[COG1806] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00410652 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000599998 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTACGTA AAGTATTTTA TATCTCAGAC GGGACAGCGA TCACAGCAGA GGTGTTTGGA 
CATGCGGTTT TGTCTCAGTT TCCTGTTGAG TTTGAAGCAC TTACTATTCC ATTTGTTGAG
ACAGAATCTA AAGCAAATGA AGTAAAGGCT CAAATCAATG ATTGTTTTAT TACAACAGGT
GAGCGCCCTT TAGTCTTCCA CTCCATCGTT AAAGCGGAGA TCAGAGACAT CATCTATAGC
AGTGAAGGCC TTGATTACGA CTTTTTGAAC ACTTTTGTGG CACCACTAGA GCAACAATTA
GGTATTTCTG CGACTCCGGT CGTTCATCGT ACTCATGGAA ACATGAATGA GAGCTATGAA
GCGCGTATCG ATGCAATAAA TTATGCGATG GATAACGATG ATGGACAGAC CTTAAAACAT
ATCGATAAGG CCGATTTAGT ACTACTTGGT GTCTCTCGTT GTGGCAAAAC ACCAAGTAGT
CTCTACCTTT CGATGCAGTT TGGTATAAAA GCCGCTAATT ATCCTTTTGT CGAAGATGAC
ATGGATAACC TTAAGCTACC CGATGCATTA AAAAAGAATA AGAGCAAACT ATTCGGTCTA
ACTATCGATC CCGTGCGTCT GCATGAGATA CGTCAAAGTC GAATGGAGAA CAGCCGATAC
TCATCATTAA GGCAGTGTCG TATCGAGGTG AAAGAGGTCG AAATGATGTA CAAGCGCGAA
AGGATCCCTT TTGTTAATAC GACCAACCAC TCTGTTGAGG AGATCGCCAC AAAAATTTTG
GCAATGACAG GACTCGAACG CCATATGTTC TAA
 
Protein sequence
MLRKVFYISD GTAITAEVFG HAVLSQFPVE FEALTIPFVE TESKANEVKA QINDCFITTG 
ERPLVFHSIV KAEIRDIIYS SEGLDYDFLN TFVAPLEQQL GISATPVVHR THGNMNESYE
ARIDAINYAM DNDDGQTLKH IDKADLVLLG VSRCGKTPSS LYLSMQFGIK AANYPFVEDD
MDNLKLPDAL KKNKSKLFGL TIDPVRLHEI RQSRMENSRY SSLRQCRIEV KEVEMMYKRE
RIPFVNTTNH SVEEIATKIL AMTGLERHMF