| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2699 |
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| Symbol | |
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| ID | 6116998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3302689 |
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| End bp | 3304947 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634230 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
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| Protein accession | YP_001761070 |
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| Protein GI | 170727044 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000755516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0562911 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAATA AAGATCTTGA AGTCACCTTA AATCTGGCAT TTCAGCAAGC CAGAGATGCA
CGTCATGAAT ATATGACGGT GGAACACCTG CTGCTCGCCT TAATAGATAA TCCAGCTGCT
CAAGAAGCCC TAGTGGCTTG CGGAGCAAAT CTTGATAAAT TGAGAGAGGA TGTATCTAAT
TTTATTCAGC AAACAACGCC AATTATTGCT GATCCAGAAG ATGAGAGGGA AACTCAGCCA
ACATTAGGTT TTCAGCGAGT TTTGCAAAGA GCGGTTTTTC ATGTTCAGTC CTCAGGTCGT
AACGAAGTTA CTGGGGCAAA TGTTTTGGTC GCTATCTTTA GCGAGCAGGA GTCACAAGCG
GTATATCTGT TGCGTAATGG TGAAGTTACC CGCTTAGATG TGGTGAATTT TATCTCTCAT
GGTGTGTCAA AAGATGAGAT AGAGCACAGC TCTCAACAGG AGCGAATAGA AGATCAAACC
GAGGGTGAAG AGGAGAAGAG TAAACTGTCT CAGTTTGCGT CTAACCTCAA TGAATTGGCG
ATGCAGGGAA GTATTGATCC TCTGATTGGT CGTAGTGATG AGATTGAGCG CTCGATTCAG
ATCTTATGTA GAAGAAGAAA GAATAATCCA TTATTAGTCG GTGAAGCTGG GGTGGGTAAA
ACAGCCATTG CCGAGGGATT AGCGTACCGA ATAGTTAAAA ATGAAGTGCC AGAGGTGATG
AGTACGGCAA CGGTTTACTC ACTTGATCTC GGTGCTTTGT TAGCAGGAAC CAAGTATCGC
GGTGATTTTG AAAAACGCTT TAAAAGTTTG CTTAAAGAGC TTGAAAGCGA TGAACATGCG
ATTTTATTTA TTGATGAGAT CCACACCATC ATCGGTGCTG GTGCGGCTTC CGGTGGGGTG
ATGGATGCAT CTAACCTGCT TAAGCCGTTA CTGTCTGGCG GCAAATTAAG GTGTATGGGC
TCAACAACTT TCCAGGAATA TCAAAGTATT TTTGAGAAAG ATAGAGCACT GGCTAGACGT
TTTCAGAAAG TGGATATTAA TGAGCCTTCA GTTGCTGAGA CCACTAAGAT CCTACAGGGA
CTTAAATCTA AATATGAGGA GCACCATGGC GTAAGATACA CCATGGCCGC CTTGAGCATT
GCAGCCCGTT TATCAGACAA GCACATCAAC GATCGTCATC TGCCCGATAA GGCAATCGAT
GTTATCGATG AAGCCGGCGC ACGCATGGCG ATGCAGCCTG CGAGCAAGCG TAAGAAGACC
ATCGGTCAGA ATGAGATTGA AGCGATTATC GCTAAGATGG CTCGTATTCC TGAGAAGTCC
GTATCGGCGA CTGACAAGGA TATGCTCAAA AACCTTGACC GTAACCTTAA GATGGTTGTG
TTTGGGCAAG ATAAAGCGAT AGAGAGCCTT AGCTCAGCTA TTCGCTTATC TCGTAGTGGC
TTAAGTGGCG AGCATAAACC TGTTGGTAGC TTTCTATTTG CAGGTCCAAC TGGGGTGGGT
AAAACTGAGG TCACCAGTCA GTTGGCTAAA TGCCTCGGCC TCAACTTAGT ACGTTTTGAT
ATGTCTGAGT ATATGGAGAG TCATACGGTT TCTCGCCTGA TTGGTGCGCC ACCTGGCTAT
GTTGGGTATG ATCAAGGCGG CTTATTAACT GACGCCGTGA TTAAGAATCC TCATTGTGTT
GTGTTATTGG ATGAGATTGA GAAAGCACAT CCAGATGTAT ACAACTTACT TCTGCAGGTG
ATGGATCACG GTATCTTAAC CGATAACAAT GGACGCAAAG CCGATTTTAG GCATGTGACC
TTGGTTATGA CGACAAATGC TGGTGTACAG GAGACGGTAA GAAAGTCTAT CGGCTTTAAA
CAGCAAGATC ATAGCCAAGA CGCCCTGTCT GAAATCAATA AGGTATTCTC ACCAGAATTT
AGAAACCGTC TGGATGAGAT CATCTGGTTT AATCACCTTG ATCTTACCGT TATTGCTAAA
GTGGTCGATA AGTTCCTCGT TGAACTGCAA GCTCAGCTTG ATGAGAAAGG GGTGACCTTG
GATGTCAGCG ATGAGGCGAG AACCTTGCTG GCTGAAAAAG GTTACGATAA AGCGATGGGG
GCGAGACCGA TGTCACGTGT GGTCACTGAG TTGATTAAAC GTCCATTGGC TGATGAGATC
TTATTCGGTA AGCTTGAGAA AGGTGGCGTG GCTCATGTGG ATATAAGCAA AGATGAGATA
ACTATCTCTG TTGAGTCGCT TGAAAAAGTA AGTCACTGA
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| Protein sequence | MLNKDLEVTL NLAFQQARDA RHEYMTVEHL LLALIDNPAA QEALVACGAN LDKLREDVSN
FIQQTTPIIA DPEDERETQP TLGFQRVLQR AVFHVQSSGR NEVTGANVLV AIFSEQESQA
VYLLRNGEVT RLDVVNFISH GVSKDEIEHS SQQERIEDQT EGEEEKSKLS QFASNLNELA
MQGSIDPLIG RSDEIERSIQ ILCRRRKNNP LLVGEAGVGK TAIAEGLAYR IVKNEVPEVM
STATVYSLDL GALLAGTKYR GDFEKRFKSL LKELESDEHA ILFIDEIHTI IGAGAASGGV
MDASNLLKPL LSGGKLRCMG STTFQEYQSI FEKDRALARR FQKVDINEPS VAETTKILQG
LKSKYEEHHG VRYTMAALSI AARLSDKHIN DRHLPDKAID VIDEAGARMA MQPASKRKKT
IGQNEIEAII AKMARIPEKS VSATDKDMLK NLDRNLKMVV FGQDKAIESL SSAIRLSRSG
LSGEHKPVGS FLFAGPTGVG KTEVTSQLAK CLGLNLVRFD MSEYMESHTV SRLIGAPPGY
VGYDQGGLLT DAVIKNPHCV VLLDEIEKAH PDVYNLLLQV MDHGILTDNN GRKADFRHVT
LVMTTNAGVQ ETVRKSIGFK QQDHSQDALS EINKVFSPEF RNRLDEIIWF NHLDLTVIAK
VVDKFLVELQ AQLDEKGVTL DVSDEARTLL AEKGYDKAMG ARPMSRVVTE LIKRPLADEI
LFGKLEKGGV AHVDISKDEI TISVESLEKV SH
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