Gene Swoo_2686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2686 
Symbol 
ID6116985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3287854 
End bp3288912 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content48% 
IMG OID641634217 
Productpeptidase T2 asparaginase 2 
Protein accessionYP_001761057 
Protein GI170727031 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1446] Asparaginase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACGC TAATGGATCA CAAGATTAAA ATTACTGGCC TACTGTTGGC TATTTTATCG 
TCATCAACTC AAGTTGTTGC CGATGAAAAG CCTTTCTCTA TTGCGATACA TGGTGGAGCG
GGCACCATCT CAAAGGCTAG CTTGACGCCA GAGCAGGAGC AAGCTTATCG GGACAAGCTT
TCACAAGCTG TCAATGCTGG TTACAGCATA TTAGAAAAGG GTGGAGATAG TCTTGTGGCC
ATTAAGGCTG CAATTAATGT GCTCGAGGAC AGTCCACTCT TCAATGCTGG TGTTGGCGCT
GTGTATACCT TCGATGGTCA ACATGAGATG GATGCTTCCA TTATGGATGG TAAGACCATG
AATGCGGGCG CGGTTGCTGG GGTTAAACAT ATTAAAAACC CGATCAATTT GGCCGATGCG
GTGATGAATA AGTCGCCTCA TGTCATGTTA TCTGGTGCTG GGGCTGAGGA GTTCGCACTC
ACGCAAGGGT TCCAGTTAGT TCCTGTGGCT CACTTTGATA CTGACAAGCG TTATAATCAA
CTTATCGATG CCAAAGAGAA GATAAAAACT GCTGAGACGG CAAAAGATTA CCAAGCCGCT
AACCACTTGA TGGGACGTGA TTATCTGGAT CTGGATTATA AATTCGGTAC TGTTGGCGCG
GTAGCCTTAG ATCAAAGTGG CAATCTGGCC GCTGGCACCT CGACAGGGGG GATGACGGCC
AAACGTTTTG GCCGTATCGG TGATTCGCCT GTGATAGGCG CTGGTACCTA CGCAGAAAAT
GGTGTGTGCG CTGTATCAGC CACTGGTCAT GGTGAGTATT TTATTCGCTA TCATGTGGCG
GGAGATATCT GCGCTAAGGT CAAGTATCAG CAAAAGTCTA TTATCCAAGC CGCCGATGAA
GTGATTAACC AGCGTCTTAT TACCGCTGGT GGCACGGGTG GTGTGATTGC ACTTGATCAA
AGGGGCAATA TTGCTACGCC GTTTAATACT GAGGGGATGT ACCGTGCGAC CCGTAAAAAT
GGCGAACCTG TACAAGTGAT GATTTGGCGA GATAAGTAG
 
Protein sequence
MDTLMDHKIK ITGLLLAILS SSTQVVADEK PFSIAIHGGA GTISKASLTP EQEQAYRDKL 
SQAVNAGYSI LEKGGDSLVA IKAAINVLED SPLFNAGVGA VYTFDGQHEM DASIMDGKTM
NAGAVAGVKH IKNPINLADA VMNKSPHVML SGAGAEEFAL TQGFQLVPVA HFDTDKRYNQ
LIDAKEKIKT AETAKDYQAA NHLMGRDYLD LDYKFGTVGA VALDQSGNLA AGTSTGGMTA
KRFGRIGDSP VIGAGTYAEN GVCAVSATGH GEYFIRYHVA GDICAKVKYQ QKSIIQAADE
VINQRLITAG GTGGVIALDQ RGNIATPFNT EGMYRATRKN GEPVQVMIWR DK