Gene Swoo_2653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2653 
Symbol 
ID6116952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3248336 
End bp3249316 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content44% 
IMG OID641634184 
Producthypothetical protein 
Protein accessionYP_001761024 
Protein GI170726998 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGTC CAAGAAGAAG TCAAATTAGT TTAGAAGATA CACCTATGTA TCATTGCTGT 
AGTCGTGTCA CGAGAAGGGC ATTTCTATTT GGCGATGATG CGCTTACTGG TAAGAACTAT
GACCACAGAC GTGATTGGGT TGAATCTCAG TTACTGAAAT TAGCAGCGGT CTTTGCTATT
GATATAGCGG CCTATGCGGT AATGTCCAAT CACTTACACT TGGTGTTGAG AGTCGATATC
TATGAAGCTA ACGCTTGGAG TGATAGAGAG GTGGTTGAAC ATTGGCATAA CTTGTTTAAA
GGCACTGATA TCACTCAAAA GTTTGCTAAA GGTGAAGTGA TAGAAAGCTT TGAAGTTAAT
AGTTTAAAGC ACTCTATCGC GCAATATCGA AGTCGGTTAT GCGATATTTC TTGGTTTATG
AGATGCTTAA ATGAGCCAAT TGCACGTATG GCGAACAAAG AAGACAAGTG CACGGGGCGG
TTTTGGGAGG GACGATTTAA ATCTCAAGCT CTGCTTGATG ATGCGGCCAT ATTGGCTTGC
ATGGCCTATG TTGACCTTAA CCCCATCAGA GCTAAGATGG CGACAACTCC AGAACGCTCA
AACTTCACCA GTATACAGCG ACGTATAGAA GCGGCATTAG ATGGCGAGCA GCCAACATCG
TTACTGCCAT TTGTGGGTAA TGAGCGCAAG GAGATGCCAA AAGGACTCAT GTTCAGCGCT
AAAGATTACC TACAACTCGT TGATGATACA GGGCGTATTA TTAGAGAGGA TAAACGTGGT
GCCATTAGCC AAGCTTCACA GCGGATACTC GATAGACTCA ATATTCCTCA AGAGAACTGG
TTGAAACTCA CGACTGACTT TGGCGATTTA TTTAAAGGAG CAGTTGGAAC ACTTCAAGAG
TTAGATGTCT TTTGTGAACA TCAAGAGAAA AAGCGCAGGC AAGGCGCTGC AAATTGTCAT
CGGTGGCTAG ACAGCAGTTA G
 
Protein sequence
MPRPRRSQIS LEDTPMYHCC SRVTRRAFLF GDDALTGKNY DHRRDWVESQ LLKLAAVFAI 
DIAAYAVMSN HLHLVLRVDI YEANAWSDRE VVEHWHNLFK GTDITQKFAK GEVIESFEVN
SLKHSIAQYR SRLCDISWFM RCLNEPIARM ANKEDKCTGR FWEGRFKSQA LLDDAAILAC
MAYVDLNPIR AKMATTPERS NFTSIQRRIE AALDGEQPTS LLPFVGNERK EMPKGLMFSA
KDYLQLVDDT GRIIREDKRG AISQASQRIL DRLNIPQENW LKLTTDFGDL FKGAVGTLQE
LDVFCEHQEK KRRQGAANCH RWLDSS