Gene Swoo_2618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2618 
Symbol 
ID6116917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand- 
Start bp3200720 
End bp3201361 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content35% 
IMG OID641634150 
Productputative sulfite oxidase subunit YedZ 
Protein accessionYP_001760990 
Protein GI170726964 
COG category[S] Function unknown 
COG ID[COG2717] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0914643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.168181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTAA CAATGAAGCA TCTATTTTGG TTAAAGCTGG CTATTCACCT ATTGGCCATT 
TTACCTGTCG CTTATTTAAT CCTATTAATT CTCACGGATA AAGCGGGTGG TGATCCTGTT 
CAATATATCA TCCACTATAC AGGCATAGGA GCGTTAAATA CTTTAGTTAT ACTTTTATGT 
ATCTCACCAA TAGCACGAAA GTTTAAGCAA GGTGTCTTGA TCCAGACTCG TCGAGTCATT 
GGACTTTATG TATTTGCTTA TGCAAATTTG CACATTTTTG CATTTATTAG TTTAGATCTA 
TTATTTGCAT GGTCATTACT ATTTGAAGAG GTAGTAAAAA GGCCATATAT ATTAGTCGGG 
GCAATTTCAT ATATTATTTT GTTTTTATTA TCTATTACTT CGTTTAAAGC TTTGAGACGG 
AAGATGGGAA AACGTTGGCA GCAGTTACAT AACCTTGTAT ACCTTTTGGC AATGCTTGTT 
CCAATTCATT TTTACTGGTC TGTAAAATCT GAAGTGATAG AGCCTGGGAT CTATATTGTT 
CTGACTAGCT TACTGCTTTT GATAAGGTCG CCACTCCCTA AACAATTTTC AGTATTTTGT 
TTGCGATTAA AAAATAAACT AGGTAGTTTT ACCTCAAGCT AA
 
Protein sequence
MRLTMKHLFW LKLAIHLLAI LPVAYLILLI LTDKAGGDPV QYIIHYTGIG ALNTLVILLC 
ISPIARKFKQ GVLIQTRRVI GLYVFAYANL HIFAFISLDL LFAWSLLFEE VVKRPYILVG 
AISYIILFLL SITSFKALRR KMGKRWQQLH NLVYLLAMLV PIHFYWSVKS EVIEPGIYIV 
LTSLLLLIRS PLPKQFSVFC LRLKNKLGSF TSS