| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2584 |
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| Symbol | |
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| ID | 6116881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3161488 |
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| End bp | 3162387 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641634114 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001760956 |
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| Protein GI | 170726930 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.671514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000651722 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACAGAG CAAAATCAAC CCTTGAACAA TGGCGGATCC TTCAAGCTGT AGTCGATCAT
AGCGGCTACT CTCAAGCTGC CAAACAACTA AATAAAAGCC AATCCTCCTT GAATCATGCG
GTTGCAAAAC TGCAAGATCA GCTTGGTGTA CAACTACTTG AAGTCAAAGG ACGAAAAGCC
TACTTAACGG CTCAGGGAGA GGTACTGCTG AGACGCTCTA GGCACATCAC AAACTCTGTT
AATGAGCTTG AACAACTGGC AAATAATTTA GAGAAAGGTT GGGAGCCAAA CCTGACAATC
GCCAGAGAGA TTATCTACCC CATGCCCACA CTTGTTAACG CATTAAAACG ATTCCAACCA
GATAGCCGAG GTACAAGAGT CACGATTTTA GATTCAGTGA TCAATGGGAC TCAAGAGTTA
ATCCGCGACG GTGAGGTAGA TATAGCAATA TGTGGCGGAG TGCCACCAAA GGGGTTTATT
GCAGAACCCT TGTGCCACAT AAACTTCTTA CTGGTGTGTC ACCCCAATCA CCCACTGTGC
TCTGAAACAG TTATTGAAGA TGATCTTATC TTGGCTCAAC ATCTACAGAT AGTCATTAAG
GACACAGGTC AATCCATTAG CACTGAAGCA GGCTGGTTAA AAGCGGAGCA AAGATGGACT
GTATCAAATT TTCATGAAGC GATAGAGATC CTTGAACAAA ATATTGGTTT TTGTTGGGTA
CCTGAATATC TGGTTTGTAA CTTAATCCAA GCGGGTAGAC TTAAGAAGTT ACGCTTAAAA
GGAAACACCC ACAAAAAAGC GCTATTGCAC TTGGTGATCC CAAATCGCGA TCTACAGGGA
CCAGCAAGTG AACATTTGGA GTCGCTAATT TTAAGAGAAC ATAAGAAAGA TATTGATTAA
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| Protein sequence | MDRAKSTLEQ WRILQAVVDH SGYSQAAKQL NKSQSSLNHA VAKLQDQLGV QLLEVKGRKA
YLTAQGEVLL RRSRHITNSV NELEQLANNL EKGWEPNLTI AREIIYPMPT LVNALKRFQP
DSRGTRVTIL DSVINGTQEL IRDGEVDIAI CGGVPPKGFI AEPLCHINFL LVCHPNHPLC
SETVIEDDLI LAQHLQIVIK DTGQSISTEA GWLKAEQRWT VSNFHEAIEI LEQNIGFCWV
PEYLVCNLIQ AGRLKKLRLK GNTHKKALLH LVIPNRDLQG PASEHLESLI LREHKKDID
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