| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2574 |
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| Symbol | |
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| ID | 6116871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3147790 |
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| End bp | 3148536 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634104 |
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| Product | hypothetical protein |
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| Protein accession | YP_001760946 |
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| Protein GI | 170726920 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000592568 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00160004 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCAGGTC ATAGTAAATG GGCCAACATC AAACACCGTA AAGCCGCTCA AGATGCAAAA
CGTGGCAAGT TGTTTACCAA ATTTATTCGT GAGCTAACTG TTGCCGCTCG TGAAGGCGGT
TCAGATGCTG ATGCCAATCC ACGCCTGCGC GCAGCGATCG ATAAAGCCTT ATCTAACAAT
ATGACCCGTG ACACGGTTGA GCGTGCAATT AAGCGTGGCG CTGGTGAACT TGATGGTCAA
GTACTTGAAA CCATCATGTA TGAAGGTTAT GGACCTGGTG GCACTGCTGT GATGGTTGAG
ACCATGACAG ATAATAAAAA CCGCACGGTT TCCGGCGTTC GTAATGCTTT TAGTAAGTCA
GGCGGCAATT TAGGGACAGA TGGTTCAGTC TCATACCTTT TTGATAAGCG TGGAGTGATC
TCTTACGGTG AAGGGATTGA TGAAGATACT ATTATGGACG CCGCGCTTGA AGCGGGAGCT
GATGATGTCG TGACCCATGA TGATGGTTCA ATTGATGTCT TTACTACACC AGAAGACTTT
GGTGGTGTTA AAGATGCACT CGATAGTGCA GGGTTTGAAT CCGTCAATGC TGAAGTGACC
ATGATCCCGT CGACTAAAGC CGATCTTGAT GCCAGTACTG CACCTAAATT TATGCGGTTG
ATTGATAATC TTGAAGATCA TGATGATGTT CAAGAGGTTT ATCATAATGC AGAGATCTCA
GATGAGATCA TGGAATCGTT AGAATAA
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| Protein sequence | MAGHSKWANI KHRKAAQDAK RGKLFTKFIR ELTVAAREGG SDADANPRLR AAIDKALSNN
MTRDTVERAI KRGAGELDGQ VLETIMYEGY GPGGTAVMVE TMTDNKNRTV SGVRNAFSKS
GGNLGTDGSV SYLFDKRGVI SYGEGIDEDT IMDAALEAGA DDVVTHDDGS IDVFTTPEDF
GGVKDALDSA GFESVNAEVT MIPSTKADLD ASTAPKFMRL IDNLEDHDDV QEVYHNAEIS
DEIMESLE
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