| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2481 |
|---|
| Symbol | |
|---|
| ID | 6116756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 3027874 |
|---|
| End bp | 3029205 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641633989 |
|---|
| Product | recombination factor protein RarA |
|---|
| Protein accession | YP_001760853 |
|---|
| Protein GI | 170726827 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000627884 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00000452551 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGTCCAGTT TTAGTTTCGA TTTTGCCCCA GATTTTAGAC CACTCGCCGC ACGCATGCGG
CCCGAGGAGC TGTCTCAGTA TATCGGCCAG TCTCACCTGT TAGGTGAAGG AAAGCCACTT
CGTAAAGCAC TTGAAGCTGG ACGTGCTCAC TCAATGATGT TTTGGGGGCC TCCAGGAACG
GGGAAAACAA CCTTAGCTGA ATTAGTCGCG AACTATGCCA ATGCACATGT TGAGCGTATC
TCTGCAGTCA CATCTGGCGT CAAAGAGATA CGTACCGCCA TTGAGCATGC AAAGAATGTG
GCTGAATCTC GAGGGCAGCG CACCTTATTG TTTGTGGATG AGGTGCATAG GTTCAATAAA
AGCCAGCAGG ATGCTTTTTT GCCTTTTATC GAAGACGGCA CCGTCATCTT TATCGGCGCG
ACCACAGAGA ATCCCTCATT TGAGATCAAT AATGCACTGC TTTCAAGGGC TCGCGTTTAC
CTTATCAAGA AATTAACCAA CGATGAGATT GTGCTGATTG TTAATCAAGC ACTGTTGGAT
GTTGAACGAG GATTGGGTAA AAGAAAGCTG ACTATTCCCG ATGCTGTTGC GAATAAACTG
GCCAATGTGT GTGATGGTGA TGCCCGTAAA GCACTTAATT TAATTGAATT AATGAGCGAT
ATGGTGGCCG ATGGTGAAAG TTTCACTGAG GAGATGATTG TCGAAGTCGC TGGTCAGCAG
TTAGCTGGTT TCGATAAAAA TGGCGATCAA TATTACGATC TGATCTCTGC CGTACACAAG
TCCATTAGAG GCTCAGCACC TGATGCGGCG CTCTATTGGT TTTGTCGTAT GTTAGAGGGG
GGCTGCGATC CTCTCTATAT TGCGCGTCGT TTATTGGCTA TCGCTTCAGA GGATATTGGT
AATGCCGACC CTGTGGCCAT GACTGTTGCT ATCAATGCAT GGGAGTGTTT TCATCGTGTT
GGGCCTTCTG AAGGAGAGCG CGCAATTGCA CAGGCCATTA TCTACCTTGC CAGTGCCCCT
AAAAGCAATG CCGTGTATAC CGCTTTTAAA GCAGCTCGCC AGCTAGCCCG TGAAACTGGC
CAAGATGCGG TACCCGAACA CTTGAGAAAT GCACCGACTC AATTGATGAA GGATATCGGC
TTTGGTGAAG GGTATCGATA TGCTCATGAT GAACCAAACT CCTATGCCAG TGGAGAGTGT
TACTTTCCTG AAAGACTCGC TGGAAGCCGT TTTTATTATC CGACGGAACA TGGCTTTGAG
AAACGAATTA AATCGAAATT AGAGCAATTG ACCCAGCTTG ATAATGATAG TGAGATAAAA
CGGTATGAAT AA
|
|---|
| Protein sequence | MSSFSFDFAP DFRPLAARMR PEELSQYIGQ SHLLGEGKPL RKALEAGRAH SMMFWGPPGT
GKTTLAELVA NYANAHVERI SAVTSGVKEI RTAIEHAKNV AESRGQRTLL FVDEVHRFNK
SQQDAFLPFI EDGTVIFIGA TTENPSFEIN NALLSRARVY LIKKLTNDEI VLIVNQALLD
VERGLGKRKL TIPDAVANKL ANVCDGDARK ALNLIELMSD MVADGESFTE EMIVEVAGQQ
LAGFDKNGDQ YYDLISAVHK SIRGSAPDAA LYWFCRMLEG GCDPLYIARR LLAIASEDIG
NADPVAMTVA INAWECFHRV GPSEGERAIA QAIIYLASAP KSNAVYTAFK AARQLARETG
QDAVPEHLRN APTQLMKDIG FGEGYRYAHD EPNSYASGEC YFPERLAGSR FYYPTEHGFE
KRIKSKLEQL TQLDNDSEIK RYE
|
|---|
| |