Gene Swoo_2461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2461 
Symbol 
ID6116735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3007429 
End bp3007881 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content45% 
IMG OID641633968 
Producthypothetical protein 
Protein accessionYP_001760833 
Protein GI170726807 
COG category[S] Function unknown 
COG ID[COG5642] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.958192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAA TGAATGTGTT TACCCCTACC AGCTCAGCAA AAAAGGTGAT GAGTTTCTGG 
CAATTAGTCG GGGTTCCAGC CCGCGGCGCC AGTTTATACA CAGCTTTGCA CAATGGGCTT
CCTTTTGAAG TTTACGCTAA GCTGGCTAAA GTATCTGGAT TGGAAAAGTC TGAACTCGCT
AATGCCACAG TTATCGCCAG CGCAACACTG CAGCGTCGGG CTAAAGCGGG AAAATTCAAT
AAAGATGAGA GCGATCGTCT ATACCGATTT GCTGAAGTTT ATAAATCCGC TTTGGATCTA
TTTGAAGGCA ATAATCATGA TGCCTCCAAC TGGCTTAAAA GTCCGGTACG TGGTCTCGGT
AACAAACGTC CTATTGAGAT GCTGTCTACC TCTGCAGAAA CTGAAGCGGT ATTAAACCTA
ATAGGCCGAT TAGAACACGG TGTATTTGCG TGA
 
Protein sequence
MTTMNVFTPT SSAKKVMSFW QLVGVPARGA SLYTALHNGL PFEVYAKLAK VSGLEKSELA 
NATVIASATL QRRAKAGKFN KDESDRLYRF AEVYKSALDL FEGNNHDASN WLKSPVRGLG
NKRPIEMLST SAETEAVLNL IGRLEHGVFA