| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2390 |
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| Symbol | |
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| ID | 6116661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2930589 |
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| End bp | 2931710 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641633896 |
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| Product | spermidine/putrescine-binding periplasmic protein-like protein |
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| Protein accession | YP_001760764 |
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| Protein GI | 170726738 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.951238 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGT ATATTGGTTT CTCCTTAATT ATCGCTATTA GCTCTCTTCT AGTTAGTCCT
TTCTCTATCT CTGATCAAAG TAGTGAAGCT CAAGTGTTAA GAGTGTTAAC TTGGGAGGGG
TATGTAACCG ACAGCGACCT CTCTCATGTT AACCAGTTAC TACTTGAACA AGGTTATGAT
TATCGCGTTG AAGTGATCTC TCCTTATGCT GAGGGGGCTG AGCAGATGTA TAACTTGATC
AGAGGCAAAG AGTGCGACAT CACTTTCTTA ACCCTCTTTT TTATTAAGAT GAAAAAGGAG
CAAACGGCTA AGCTACTGCA ACCTGTCAAT ATAGACTCTC CCAGATTGAC TAATTATCAG
CACCTCTATC CAAACTTAGC CAGGTTAAAA ATGGGGATAG ATAGAGATGG ACTGCCGCTT
TATATACCAT GGGGCGGGGG GATTTATGGG TTCTATATCG ATAATGACAG AGTTCCTGTG
TCCCTTAGGC CCTACTCAGT AAAAGCGTTA TGGCAGCCAG AGTGGAGGCA TAAATTCTCG
TTGAATGGCG CCCAAGAGTG GTACAACATA GGCCTGACAT TAATGAGCCA AGGCGAGTCC
CCCTTCTATC TTTATGAAGA GTTTCAAAAA GAAAACAGAA GTGGCGTCAT GGTTAAATCT
GCACCAGATG GGGCTTTTCA AACTCAACTA ACAGCACTAT ATGATGCCGC AGGCAGCTTC
TGGACTGATG CACCAACGTT TAATGATGAG TTATTGATTG TCAGTAGTTG GGGGCCAGAG
ATACATGCGG AAAATATGAG AGGTGGGAAT TGGGAGCTTA TCGATTTTGA AGAGGGTCAT
ATGGCTTGGC TTGATACGAT AAATTTTGTA AAAGGGTTAT CAGGTAGGAA GCTCGAGGCA
GCAGAGATTT TCGCCAATTA CTTTATCGGT AAAGAGGTTC AAAACCGTAT ATCAAATGAG
CTCTCCATGG TGCCAGCCTC TAAAACAGTC CCAGTTAACA CTATTTTGGG GGATCCCGAT
AAAATATTAA ATGAAAACAT GTTTGTCCCC CCCTATGATC AAAGAAGCTA TGGATTAATG
AAAAAGATGC TTGAAAGGGC TAAAGAGCAG AGACAACCTT AA
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| Protein sequence | MKKYIGFSLI IAISSLLVSP FSISDQSSEA QVLRVLTWEG YVTDSDLSHV NQLLLEQGYD
YRVEVISPYA EGAEQMYNLI RGKECDITFL TLFFIKMKKE QTAKLLQPVN IDSPRLTNYQ
HLYPNLARLK MGIDRDGLPL YIPWGGGIYG FYIDNDRVPV SLRPYSVKAL WQPEWRHKFS
LNGAQEWYNI GLTLMSQGES PFYLYEEFQK ENRSGVMVKS APDGAFQTQL TALYDAAGSF
WTDAPTFNDE LLIVSSWGPE IHAENMRGGN WELIDFEEGH MAWLDTINFV KGLSGRKLEA
AEIFANYFIG KEVQNRISNE LSMVPASKTV PVNTILGDPD KILNENMFVP PYDQRSYGLM
KKMLERAKEQ RQP
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