| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2382 |
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| Symbol | |
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| ID | 6116653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2922759 |
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| End bp | 2923823 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641633888 |
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| Product | integrase family protein |
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| Protein accession | YP_001760756 |
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| Protein GI | 170726730 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0941885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.501513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAA TGACCCCCTT TCAAACAGGT TCCCTGTTAA GTCGGCCGGC TAATACAGAA
GAAAAGCAGT TTTATGAGGA GCGGGAGCTG CCGCTCTCAA TCTTAGACGA TTACAAAAGT
GCTGCGAGTG AAACCGAGTA CGAGATCTCT GCAAATACAC GTAGAGCCTA CACCTCCAGT
TTTTCGCTAT TTTCAAATTA TTGTAGCGAG CATAGGTTAA ATACCTTACC AGCAGATCCC
AGAACAGTTA TCTCATTTAT TGGTTATCAA AAAGAGTTGA TCCAATCACG AAGTGGAGCA
CAACTTTCTC GGCAAACCTT AACTAGTCGC TTAGCTGCTA TTCGTTATTT TCATATTCAA
GCTGGATATC ATTCTCCAAC AGAACACCCG CTTGTCATCA GAGTGATGCG TGGCTTAAGT
CGAAATAAAC AGCGAACAGT ATCTGATTAC GATCAACAAC CTATTATGTA TGATGAGCTT
GAGATGTTAC TCAATGTGAT TGAACTGCAG CCACATGCGA TCACGAGAGC ACGAGATAAA
GCAATTATTC AATTAGGGTT TCAAGGTGGA TTTCGTCGTT CAGAATTGGC AGACATTCGG
GTGAATCATT TGAGTTTTTT AAGGGATAAG TTAAAAGTTA GACTCCCCTA CTCCAAGAGC
AATCAACAGG GACAAAGAGA GTGGAAGAAT CTTCCTCAAT CTGAGCCTTT TGCTGCTTTT
GATGCCGTTA AACATTGGTT AACTGTTTCA AAAATTCAAG ATGGACATCT GTTTAGATCG
CTAACCAGAG ACGGCAGGCA GGTGAGAGAT TATAGTGTTG CAACTCAAGG TATAGAGAGT
AAAAAGAGAA ACTCCGGATT TCTTCGTGGA GATGATATTT ACCAGATGAT CAGAAAATAC
TGCACTAAAG CGGGACTTAG CCACGAATTT TATGGTGCTC ATAGTTTACG AAGTGGCTGC
GTAACTCAGC TTCATGAAAA TGATAAAGAT CACCTCTATA TTATGGCAAG AACTGGTCAT
ACAGATCCAC GTTCGCTCAA GCATTATCTC AAACCAAAAG ACTAG
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| Protein sequence | MNKMTPFQTG SLLSRPANTE EKQFYEEREL PLSILDDYKS AASETEYEIS ANTRRAYTSS
FSLFSNYCSE HRLNTLPADP RTVISFIGYQ KELIQSRSGA QLSRQTLTSR LAAIRYFHIQ
AGYHSPTEHP LVIRVMRGLS RNKQRTVSDY DQQPIMYDEL EMLLNVIELQ PHAITRARDK
AIIQLGFQGG FRRSELADIR VNHLSFLRDK LKVRLPYSKS NQQGQREWKN LPQSEPFAAF
DAVKHWLTVS KIQDGHLFRS LTRDGRQVRD YSVATQGIES KKRNSGFLRG DDIYQMIRKY
CTKAGLSHEF YGAHSLRSGC VTQLHENDKD HLYIMARTGH TDPRSLKHYL KPKD
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