Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2300 |
Symbol | |
ID | 6116571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2823820 |
End bp | 2825835 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641633806 |
Product | NADH:flavin oxidoreductase/NADH oxidase |
Protein accession | YP_001760674 |
Protein GI | 170726648 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0492] Thioredoxin reductase [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.200632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.137669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTTC CGCATTTATT AGAACCCTTA GATCTTGGCT TTACTCAATT AAAGAACCGT GTGCTTATGG GCTCCATGCA CACAGGCCTA GAGGAAGAAA AGGGCGGCTT TGAGAAACTG GCACAGTTTT ATAAAGAGCG TGCTATTGGT GGTGTTAGCT TAATTGTCAC AGGTGGGATC TCGCCCAATT TACGCGGACG TTTGGCACCT AATGCTTGTC AGCTTAGTTT TCCATGGCAA GTTGGGAAAC ATCAAATTGT TACTAAGGCG GTTCATGAAG CGGGTGGCAA GATCTGCATG CAACTTTTGC ATGCTGGACG CTATGGCTAT CACCCATTCT CTCAAGCGCC TAGCAAGATA AAGTCTCCTA TCACGCCTTT CACCCCCTCT GCGATGTCTG CAAGACAGGT GCGTGGCACC ATTAAGGATT ACGCTACCTC AGCGGCCTTA TCCCAAAAGG CTGGATATGA TGGTGTTGAG GTGATGGGCT CTGAAGGTTA CCTGATTAAC CAGTTTGTTT CTGCCCGTAC CAATGTCCGA GATGATGAGT GGGGAGGGAG TTTCGAAAAT CGGATTAAAT TCCCACTGGA GATAGTCCGC AGTATTAGAA AGCGTGTCGG CGATAACTTT ATTATCATCT TTAGACTCTC GATGTTAGAT CTGGTTGACA ATGGTTCGAC TTGGGATGAA GTGGTGGAGC TGGCTAAACT GTTAGAGCAA GCGGGGGTCA CCATTATCAA TACCGGCATT GGCTGGCACG AAGCGAGAGT GCCTACTATT GCAACCAGTG TACCAAGGGG CGGATTTGCT TGGGTAACCG AGCGACTCAA AAAAGAGATG AATATCCCGC TTGTGGCAAC CAACAGAATC AATACGCCTG AGATTGCTGA ACATATCATT GAGTCAGGCC AAGCGGATAT GGTGTCAATG GCTCGCCCAT TCTTAGCCGA CCCCGACTTT GTTAACAAGG CTGAGGCAAA TACCCCAGAG CTTATCAACA CCTGTATTGG TTGTAATCAG GCTTGTTTAG ACCATACCTT CTCACTAAAA CGTGCGACCT GCCTAGTGAA CCCTAGAGCC TGTTACGAGA CTGAGATCAA CTTCATTCCA ACGACGAACA AGAAACGTAT TGCTGTGATG GGCGCAGGCC CTGCAGGAAT GGCGTTTTCT GTCTATGCTG CAAGCCGGGG CCACGAAGTG GTGCTGTTCG AAGCTAAGTC AGAGGTGGGT GGTCAGTTTA ATCTTGCTCG TAAGATCCCG GGTAAAGAGG AGTTCGATGA AACCATACGT TACTTTATCA ATCAGATGAA GCTGCACAAG GTTGAGTTGC GTTTAAATAC TCGACTCGAC GCCTCTGTGA TCAGGGATGA GCAGTTTGAT GAGATTGTTA TGTCATCGGG TGTTGTGCCA AGAAAAATAG ATCTTCCTGG TTTCGATAAC CCGAAAGTAG TGGACTACCA ACAGGTGCTT AACCGTGAAG TGGCATTAGG TGAACGTGTT GCATTAATCG GCGCTGGCGG TATTGGTTTT GATATGGCCC ACTATCTCTG CGAGCCTGAG TCGACAACAC TGCAACCTGA TAAATGGTTA AAGCAGTGGG GTATCGATAA GGAGTACGCA GAGCGAGGCG GTTTGACTAG TCCCCAAGAG GCGAGTGAGC ACCGTGATAT CTATCTGCTG CAACGTAAAA CCAGCAAGAT GGGTAAAGGA TTAGGTAAAA CCACAGGTTG GATCCATAGA CTGGTGTTAA AGAAGCATCA GGTTAAGATG AAGACTGGCG TCAGTTATCA AAAGTTCGAC GAGCAGGGCT TGCACATCAG TGTGGGTGAA CAAGATGAGA TCTTGGCGGT GGATAATGTC GTGCTTTGCG CCGGACAGGA GTCGAATCGT ACTTTGCAAG AGGAGATGCA AGCAACAGGT TTACCTGTAC ATCTTATCGG CGGCGTTGAC GTTGCAGCTG AGCTCGATGC CAAGCGTGCG ATTCGTCAAG GGGCTGAGTT AGCGATTAAG CTTTAA
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Protein sequence | MSFPHLLEPL DLGFTQLKNR VLMGSMHTGL EEEKGGFEKL AQFYKERAIG GVSLIVTGGI SPNLRGRLAP NACQLSFPWQ VGKHQIVTKA VHEAGGKICM QLLHAGRYGY HPFSQAPSKI KSPITPFTPS AMSARQVRGT IKDYATSAAL SQKAGYDGVE VMGSEGYLIN QFVSARTNVR DDEWGGSFEN RIKFPLEIVR SIRKRVGDNF IIIFRLSMLD LVDNGSTWDE VVELAKLLEQ AGVTIINTGI GWHEARVPTI ATSVPRGGFA WVTERLKKEM NIPLVATNRI NTPEIAEHII ESGQADMVSM ARPFLADPDF VNKAEANTPE LINTCIGCNQ ACLDHTFSLK RATCLVNPRA CYETEINFIP TTNKKRIAVM GAGPAGMAFS VYAASRGHEV VLFEAKSEVG GQFNLARKIP GKEEFDETIR YFINQMKLHK VELRLNTRLD ASVIRDEQFD EIVMSSGVVP RKIDLPGFDN PKVVDYQQVL NREVALGERV ALIGAGGIGF DMAHYLCEPE STTLQPDKWL KQWGIDKEYA ERGGLTSPQE ASEHRDIYLL QRKTSKMGKG LGKTTGWIHR LVLKKHQVKM KTGVSYQKFD EQGLHISVGE QDEILAVDNV VLCAGQESNR TLQEEMQATG LPVHLIGGVD VAAELDAKRA IRQGAELAIK L
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