Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2243 |
Symbol | |
ID | 6116513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2752243 |
End bp | 2753619 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641633750 |
Product | hypothetical protein |
Protein accession | YP_001760619 |
Protein GI | 170726593 |
COG category | [S] Function unknown |
COG ID | [COG4949] Uncharacterized membrane-anchored protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.129257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0137892 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATCAAG CTATTAAAGA GTCTGTTATA GCACCAGAGA GTTTGGTATC GGAGTGCCTG AATAATGAAG AGGCGTGCGA GGCTCGTTTT GAGCAAAGAT CCATACCTGT TTCCCCACTT CGTCAACAGA TCTCCTTAGA GCTACATAAT AGACCCTCAC CAAAAGTAGG TATTCCCACT TGCGTTAGTC ATCTAGCCAT TCGAGTCAAC TTGGAACAGC GTCAGAGAGA GTATCAACAT CTAAGCGCTT TTTGTCATCG ATACAGTGTC AATCCGCCCT GTATTGACGC TGGCTGTTTT TTTCAGGACT TTGGCGGTTT TGAGCTGAGA TGGGAGCGGC ATCTTGAGTT TTCTACCTAT AGCTTTATTC GCAAAGGTCA AGGTATGCAA CTGTTCGATG GTTACAGTAC AGAGCGAGTG CCTCAAGATT GGTTTGATGA GTTGGTTGGT GAACTTATTT GCGCGATAAA TCTCACTTTC AGTAAAGATG AGCTCTCTGA GCGGGAAATA TATCAGGCTT TTGAGGGGCA GCAAGTGATA GGTAGTCTTG TCGCTGATGG GCGCGCCCGA GTCTACTCCT CCTTTAGATT GCACAGTGAT GGGTTTAGCC GAACCATCAT ACAGAGTGAG CAGCTTAACA GCTATCAGGC GGGGAGACTT ATCCAGAGAA CATTAGAGAT AGAGACTTAT CAGATGTTGG CACTGCTTAG TTTGCCGATA GCACGGGAGT TGTCACCTAA GGTGTCACAG ATGGAGAGTG AGCTTGTCGC GTTAAATCAA CAGATGGCCA ACTTGTCACA ACACGATGAC AGTGAGATGT TAGATAAACT CTCTAACCTC GCCGGACAAA CTGAGCAGCT GATTGCAGAT ATCAGCTATC GATTTAGCGC AACGAATGCC TATTATGCCC TTGTTTGCGC TCGACTTGAG CAGTTAAAGG AGCAAGATAT CACCGGAGTT GAACGTATTA ATGAGTTTGT GACTCGAAGG TTGAACCCAG GGATCAGAAC TTGCCAGGCC TTAACTCAAA GGTTGGAAGA TCTTACCCGT CGTATCGCCA GAGCAAGCAG TTTGCTCAGA ACTCGGGTTG ATCTAAGTAT TGAGCAGCAA AACCAGCAGC TACTACATGC AATAAATCAG AGAGGCAAGA TTCAACTTAG ATTACAGCAG ATGGTTGAAG GGGTATCAGT AGCCGCCATG GCGTATTATT TAATGGGACT TTTAGAGTAT ATTCTCAGCG CACTTAATGC CAATGGGTAT CAGTTTAATA AGCTGATGTT TAAAGGAGTT GCAGTGCCTG TGTTTCTATT CTTTGCATGG TGGCTACTTA GGTTCGCCAT GGGCTATATC AGAAAAGAGC CTGAGCGGCC GCTATAG
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Protein sequence | MNQAIKESVI APESLVSECL NNEEACEARF EQRSIPVSPL RQQISLELHN RPSPKVGIPT CVSHLAIRVN LEQRQREYQH LSAFCHRYSV NPPCIDAGCF FQDFGGFELR WERHLEFSTY SFIRKGQGMQ LFDGYSTERV PQDWFDELVG ELICAINLTF SKDELSEREI YQAFEGQQVI GSLVADGRAR VYSSFRLHSD GFSRTIIQSE QLNSYQAGRL IQRTLEIETY QMLALLSLPI ARELSPKVSQ MESELVALNQ QMANLSQHDD SEMLDKLSNL AGQTEQLIAD ISYRFSATNA YYALVCARLE QLKEQDITGV ERINEFVTRR LNPGIRTCQA LTQRLEDLTR RIARASSLLR TRVDLSIEQQ NQQLLHAINQ RGKIQLRLQQ MVEGVSVAAM AYYLMGLLEY ILSALNANGY QFNKLMFKGV AVPVFLFFAW WLLRFAMGYI RKEPERPL
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