| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2197 |
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| Symbol | |
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| ID | 6116467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2690617 |
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| End bp | 2691234 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641633705 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_001760574 |
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| Protein GI | 170726548 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0519695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000111985 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTAAACC CAGCATCCAA CTCAGCTATT GTGCTCGATT TTGAAACCAC AGGCCTCTCC
CCCAACCAAG GAGATCGTGC CATTGAAATT GGTGCTGTAA AATTAGAAGA TGGCGTGGTT
GTCGATACGT TTCAAGCGTT AATGAATCCA GGATTTCGGA TCACCAGCTT TATTGAAAGT
TACACAGGGA TAACCAATCA GATGCTAAGC ACTGCCGCAC CTTGTGAAGT CGTGATGGAT
CGTTTCGCTG ATTTTATTCA TGGCAGTAAT CTTGTCGCCC ACAATGCCTC ATTCGATCAA
CGTTTTCTCG ATGCTGAGCT CAGCTTAATA AACCGTCACT ACACAGGTGA ATTTGCCTGC
TCCATGTTAA TCGCTAGGCG CATCTATCAA GAAGCGCCAA ATCATAAACT CGGTGGTTTA
GTCGCATTTA GGCAGATTGA AAACGATGGC GTATTTCACC GCGCATTAGC CGACTCAGAG
ATGACGGCAA AGCTTTGGCT GACAATGATT GAAGATATTC AAACTCGTTA CTCTATTACC
ACTCCTAGCT TTAAGCTGAT GCAAAAGATA GCAAAAAAAC CTAAATCAAG TGTCAATGCT
TTTTTATGTA CGCAATAA
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| Protein sequence | MLNPASNSAI VLDFETTGLS PNQGDRAIEI GAVKLEDGVV VDTFQALMNP GFRITSFIES
YTGITNQMLS TAAPCEVVMD RFADFIHGSN LVAHNASFDQ RFLDAELSLI NRHYTGEFAC
SMLIARRIYQ EAPNHKLGGL VAFRQIENDG VFHRALADSE MTAKLWLTMI EDIQTRYSIT
TPSFKLMQKI AKKPKSSVNA FLCTQ
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