| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2182 |
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| Symbol | |
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| ID | 6116452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2676232 |
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| End bp | 2676969 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633690 |
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| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
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| Protein accession | YP_001760559 |
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| Protein GI | 170726533 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000335618 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0211703 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGTAA CTCTGTTAAT CCCAGCTCGC TATGGCTCAA GCCGTTTTCC TGGCAAGCCT
TTGGCGCCGA TTAACGGTAA GCCGATGATC CAACACGTCT ATGAGCGTGC TTCTTTGGCT
AAGGGCTTAA CTGCAATTTA TGTTGCAACC GATGATGATC GCATCAAAGA AGCTGTTGAA
GCTTTTGGTG GCAAAGTGGT GATGACAGAT CCACAAGCCG CTTCTGGTAC TGACCGAATT
GAAGATGCCA TCACACAATT GGGTTTGAAA GATGATGATC TAATCGTCAA TCTGCAGGGA
GATCAGCCGC TGATCGACCC AATCTCAATT GAGCAAGTAA TCACACTGTT CGAACGTCAC
CCTGGTGAGT TCAGCATGGC AACACTTGGG GTTGAGATAA CAGAAAAAGC AGAACTTGAC
GATCCTAAAC ACGTTAAAAT GGTGTTTGAT AATAACTTTA ATGCCCTGTA TTTCTCACGT
GCACGCATTC CATTTGGTCG TGACACTAAC GATTACCCAG TGTATAAGCA TTTAGGGATC
TATGCTTATA CACGCAGCTT CATCTCTACT TTTGCCAAAC TACCTTTAGG CCGACTAGAA
GATTTAGAGA AGCTTGAGCA ACTCAGAGCC CTTGAGCATG GTCATAAGAT AAAAGTAGCT
ATCAGTGCTT TTGACTCTCC AGAGGTTGAT ACACCGGAAG ATATCCGCAT CTGTGAAGCA
CGTTTGGCCG TTGATTAA
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| Protein sequence | MNVTLLIPAR YGSSRFPGKP LAPINGKPMI QHVYERASLA KGLTAIYVAT DDDRIKEAVE
AFGGKVVMTD PQAASGTDRI EDAITQLGLK DDDLIVNLQG DQPLIDPISI EQVITLFERH
PGEFSMATLG VEITEKAELD DPKHVKMVFD NNFNALYFSR ARIPFGRDTN DYPVYKHLGI
YAYTRSFIST FAKLPLGRLE DLEKLEQLRA LEHGHKIKVA ISAFDSPEVD TPEDIRICEA
RLAVD
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