| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2079 |
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| Symbol | |
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| ID | 6116342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2550083 |
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| End bp | 2550871 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641633582 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001760458 |
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| Protein GI | 170726432 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGGGCTAT TTAGAGCTTT TAATTGGATT GCAGCCACTA TTTTTCTCCT TGTTCATATG
AGTTTACTCG CACAAGAGAG ACCTGCACGT ATTGTGTTTT CAACCAGCAA TTATGAGCCC
TATGTGGTCA ATACCAAAGG GGTTGCAAGT GGAGTGATCC CTGACATTAT CGAAGAGGCG
TTAAAAGGTA GTGTTTTTGC ACCTGATATT ATTTTCGAGC CATGGCTCCG TGGTGAGCAT
GCATTAAAAG CAGGAAAGGT ATTTGCCTGT TTCCCCTACC TTAAAACAGC AGAGCGGCAG
GGTGAGTTTG TTTTTTCTGA TCCACTTATC TATTTTTTTC CTAAATTCTT TTACCTGAAA
TCTCGCTTCC CCAATGGGTT TGAATGGCAG AAGTTGTCTG ACTTCAAAGG TTACACTTTA
GGAGGTGTCA GGGGATACTG GTATGAGAAA CAGTTTAAAC AAGCAGGTTT AACGATTCAT
TATGTGACTT CAGATAAACA GAATATTGAG ATGCTAAAGC TAAAAAGGGT AGATTTTACC
TTAATAGATG AGCTAGTGGG GTGGGAGTTA GTGGGTCAAT CTTTCCCTAA AGAGCTTGCC
AGTTATGAGG TGGCTTCGAA GCCTGAAAGC AGCGCAGCTT TTCACCTGAT GATCTCGCAC
AACTACCCAA ACTCAAAGGC GATCACTCGG ACGTTTAACT TAGGGTTAAG GAGGATTGTT
GAAAACGGAA CTTATCAGAA GATATTGGAG CGCTATCAGG TGCCTCAAGG GTACTCTGTG
GCTGATTGA
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| Protein sequence | MGLFRAFNWI AATIFLLVHM SLLAQERPAR IVFSTSNYEP YVVNTKGVAS GVIPDIIEEA
LKGSVFAPDI IFEPWLRGEH ALKAGKVFAC FPYLKTAERQ GEFVFSDPLI YFFPKFFYLK
SRFPNGFEWQ KLSDFKGYTL GGVRGYWYEK QFKQAGLTIH YVTSDKQNIE MLKLKRVDFT
LIDELVGWEL VGQSFPKELA SYEVASKPES SAAFHLMISH NYPNSKAITR TFNLGLRRIV
ENGTYQKILE RYQVPQGYSV AD
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