Gene Swoo_2025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2025 
Symbol 
ID6116288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2487498 
End bp2488208 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content34% 
IMG OID641633528 
Producthypothetical protein 
Protein accessionYP_001760404 
Protein GI170726378 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGATA CTGTCAGCTT GCTAACAAAG TTTAATTTTT TACAAAATTT TGCATCTTTG 
ATTAGTGCCT GGATCAACCC TGCTATTATT CATAACTTAG AAAAGTATCA TATTCTTAAA
AAGGTGCACT ATTTAACGGC AATAGAAAAT ATTGAAGGGG ATTATTTGGA GTTTGGCGTT
TTTACTGGTA GCTCTTTTTG CCACTCGATT CGTGTTCATC AGATGCAAAA AAAGTATTGT
GGTGAGCACA CCGCAATGAA GTTTTATGGG TTTGATTCAT TTTCTGGATT TGGAAGTATG
GAAAGTGATG AAAACCACCC CTTTTATAGT CAAGTTGATT TCAACTCAAA TATTGAATAT
GTAGAAAAGC GGATACGACG CGTAGCTAAA AATACAGAAT ATAAACTTGT TGAGGGTTAC
TTTCAAGATT CACTTACATC AGGTCCTAAG AGTTATGGTA TTGATAAGTC TAAAATTATA
TTTATTGATA GTGATACTTT CAGCAGTGCT GCTCAAGCAT TTGAATTTTG CTCTACAACC
ATTCAACAGG GAACTTACAT TATTTTAGAT GACCATTTTT CCTACTGTGG AGATATAAAT
AGGGGAGTTG CTGGGGCATT CAAAGAGTTT ATTGAGAAGA GAGAAATTGA AGTTCGACTT
GTCTTTCATT ATGGAATGGG GGGGAGTGTT TATGTTGTAT CAAATATGTG A
 
Protein sequence
MSDTVSLLTK FNFLQNFASL ISAWINPAII HNLEKYHILK KVHYLTAIEN IEGDYLEFGV 
FTGSSFCHSI RVHQMQKKYC GEHTAMKFYG FDSFSGFGSM ESDENHPFYS QVDFNSNIEY
VEKRIRRVAK NTEYKLVEGY FQDSLTSGPK SYGIDKSKII FIDSDTFSSA AQAFEFCSTT
IQQGTYIILD DHFSYCGDIN RGVAGAFKEF IEKREIEVRL VFHYGMGGSV YVVSNM