Gene Swoo_2004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2004 
Symbol 
ID6116267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2463172 
End bp2463945 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content37% 
IMG OID641633507 
ProductABC-2 type transporter 
Protein accessionYP_001760383 
Protein GI170726357 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.49989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.589984 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATAG CAAACATAAA ATACTGGGCT CGCGATGCAT ATAATTTGAT CTATTTAGAT 
CTACTTCAGT TTTTCAGAAG TAAATTAATC GTTATTTCGT CACTGTTAAC CTCAGTAACT
ATGGTTTTGG CATTTGGATT AGGAGCGGAT AATGGACAAC CTATAGTCCC TATCGAAGGC
AATTATTTTG CCTTTATTCT TCCCGGTATT CTTGCTGTAG GGATCATGTT TAGCAGCACC
TATACAATGG GGTACACATT TATTGTAGAT TGCCAACGCA GAACGATTGA AGACATAGTG
CTCTCTCCGC TTTCATATGT GGGCTTTATA GTCAGTAGAA TCATTGGCAT GTCATTAAAA
TGTTCATTGC AATTCTTACT GGTATTAATG ATCTCAATGC TGTTTTTTAA TGCCACAATT
GAATCCTACG TATTGCTATT TTTTGCATTT TTTACCGAAT GCATCACCTT TGCAGCATTA
GGGATCATCG TTGCCAGCTT CACCAACGAA ATATCCTTTT CTAGCTTAAT CAATATTATT
ATCATCCCGT TAAGTTATTT CGGAGGAGTA TTTTTTCCAC TGGATAATTT CGGTTCATTT
TCAAATGTTG TAAGTGCACT CCCCTTAGCT GCTCATATCG AGGTTTTTCG AGATGCTATG
GCGGCAACCA GCTCAACAGA CCTCTACTTT AATCTCTTAC TGACAACCTT TTACTCACTT
ACTTCAATTT GGGTTGCCAT GTATGTCTTT AAATTCCGTA TTCAAAGGTT CTAA
 
Protein sequence
MEIANIKYWA RDAYNLIYLD LLQFFRSKLI VISSLLTSVT MVLAFGLGAD NGQPIVPIEG 
NYFAFILPGI LAVGIMFSST YTMGYTFIVD CQRRTIEDIV LSPLSYVGFI VSRIIGMSLK
CSLQFLLVLM ISMLFFNATI ESYVLLFFAF FTECITFAAL GIIVASFTNE ISFSSLINII
IIPLSYFGGV FFPLDNFGSF SNVVSALPLA AHIEVFRDAM AATSSTDLYF NLLLTTFYSL
TSIWVAMYVF KFRIQRF