Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2004 |
Symbol | |
ID | 6116267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 2463172 |
End bp | 2463945 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641633507 |
Product | ABC-2 type transporter |
Protein accession | YP_001760383 |
Protein GI | 170726357 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.49989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.589984 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAATAG CAAACATAAA ATACTGGGCT CGCGATGCAT ATAATTTGAT CTATTTAGAT CTACTTCAGT TTTTCAGAAG TAAATTAATC GTTATTTCGT CACTGTTAAC CTCAGTAACT ATGGTTTTGG CATTTGGATT AGGAGCGGAT AATGGACAAC CTATAGTCCC TATCGAAGGC AATTATTTTG CCTTTATTCT TCCCGGTATT CTTGCTGTAG GGATCATGTT TAGCAGCACC TATACAATGG GGTACACATT TATTGTAGAT TGCCAACGCA GAACGATTGA AGACATAGTG CTCTCTCCGC TTTCATATGT GGGCTTTATA GTCAGTAGAA TCATTGGCAT GTCATTAAAA TGTTCATTGC AATTCTTACT GGTATTAATG ATCTCAATGC TGTTTTTTAA TGCCACAATT GAATCCTACG TATTGCTATT TTTTGCATTT TTTACCGAAT GCATCACCTT TGCAGCATTA GGGATCATCG TTGCCAGCTT CACCAACGAA ATATCCTTTT CTAGCTTAAT CAATATTATT ATCATCCCGT TAAGTTATTT CGGAGGAGTA TTTTTTCCAC TGGATAATTT CGGTTCATTT TCAAATGTTG TAAGTGCACT CCCCTTAGCT GCTCATATCG AGGTTTTTCG AGATGCTATG GCGGCAACCA GCTCAACAGA CCTCTACTTT AATCTCTTAC TGACAACCTT TTACTCACTT ACTTCAATTT GGGTTGCCAT GTATGTCTTT AAATTCCGTA TTCAAAGGTT CTAA
|
Protein sequence | MEIANIKYWA RDAYNLIYLD LLQFFRSKLI VISSLLTSVT MVLAFGLGAD NGQPIVPIEG NYFAFILPGI LAVGIMFSST YTMGYTFIVD CQRRTIEDIV LSPLSYVGFI VSRIIGMSLK CSLQFLLVLM ISMLFFNATI ESYVLLFFAF FTECITFAAL GIIVASFTNE ISFSSLINII IIPLSYFGGV FFPLDNFGSF SNVVSALPLA AHIEVFRDAM AATSSTDLYF NLLLTTFYSL TSIWVAMYVF KFRIQRF
|
| |