| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1996 |
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| Symbol | |
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| ID | 6116259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2453690 |
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| End bp | 2455336 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641633499 |
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| Product | hypothetical protein |
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| Protein accession | YP_001760375 |
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| Protein GI | 170726349 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0665457 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGATTA TCATTCCAAT GGCTGGCTTT GGCGAGCGGT TTCGAAAAAA GGGCTACACA
ATCCCTAAGC CTCTTATCGA AATAGAAGGT AAGCCAATGA TTGCTCATGT AATAGATCTG
TTTCCTGATG AATCAGATAT TACTTTTATT TGTAATCGAG AACACCTAGA AACTCCACGT
TATAAAATGG AGTCAACGAT AAAAAAGTAT TGTAAAACGG CAAAAATACT TGCGATTCCC
CCTCACAAAT TTGGGCCAGT ATATTCGGTT ATGCAAGTTA TCGAAGATAT AGATCTAAGC
AAACCTACCA TAGTTAATTA CTGTGACTTC AGCTGTTTAT GGGATTGGTA TCACTTTAAA
CAGTTCGTGT TAAAGAGCAA AGTAGATGGA GCTATTCCAT GTTATCGAGG TTTTCATCCC
CACTCATTAG GCTCAACATA CTACGCCTAT ATTAAAACCT TGAATGACAG TGTAATTGAT
ATTCAAGAAA AACAACCATT TACAGATTCA CCTATGAACG AATATGCATC AAGTGGAACC
TACTATTTTG CTAGTGGTTC GATACTAAAA AAGTATTTCA ATACCATGAT TCTTCAAGAA
CTAAATACCA ATCAAGAGTA TTACGTCAGT TTGGCATATA TCCCCATGTT AGCGGATAAC
TGTAAGGTAG TCGTTTATGA AATTTCACAT TTCATGCAAT GGGGTACCCC AGAGGACCTC
GCAGAATATA AAATGTGGTC AGCTGCATTT TTGGCATTAA TAAGCCCAAG AGTTAGAACC
GCTAAACACA AAGGAGCTGT ATTTGTTCCC ATGGCTGGCC AAGGTCAACG CTTTCTAGAC
GCCGGTTACC AAACTCCTAA ACCACTTATC CCCGTATCAG GGAAAGCAAT GGCTATCCAA
GCTATAAATG ATCTACCTAT CACAGATAAA CAATATGCAA TTTTACGGGC CGACCTCCCA
TATATTAGTC AATTGATTCT TGAACTTAAA AATAACTTTC CTACCATGAA TATCTCAATA
CTTGATCAAA TTACAGATGG TCAGGCGAGA ACTTGTATGT CAGCGATGAA CAATATAGAG
GTAGATCTCC CACTAACAAT TGGCGCCTGT GATAATGGTT CAATTTACGA TACTACAAAA
TTTGAAAACC TACTCTCTAT GCCTGATACA GATATCATCG TCTGGACCAC AAAGGAGCAT
GCTTTAGCAA AAAGAAAACC TGAGATGTTT GGCTGGATAG AATCTACACC CGAAAATAAG
GTGACAAGAG TATCAGTGAA GGCACCACTT AATAACCCAT CTGAAGACTC TATCATTATT
GGTTGTTTTA CATTTAAAAG AGCTGGAGAC TTTTCACTTT TATTTGAATC ACTTATAAAC
CGAAAAGGCG AAATGAACGG AGAGTACTAC ATTGATTCAA TGATTGAAGA TGCACTTAAC
ATAGGAATGA ACGTCTATAT TTTCGACGTG GATCATTATT TGGGCTGGGG GGTTCCCGAT
GACCTAAACA TATTCAGTTA TTGGCAATCC TGCTTTCACA AATGGAATAC GCATCACTAC
TGCTTAACCC AAGATAATCG AGTCCCAGTT GAAAGCCAGG AGCAGCGTTT TGAAAGTAGC
CCCATTCACA CTTACCTTGA AAAGTAA
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| Protein sequence | MQIIIPMAGF GERFRKKGYT IPKPLIEIEG KPMIAHVIDL FPDESDITFI CNREHLETPR
YKMESTIKKY CKTAKILAIP PHKFGPVYSV MQVIEDIDLS KPTIVNYCDF SCLWDWYHFK
QFVLKSKVDG AIPCYRGFHP HSLGSTYYAY IKTLNDSVID IQEKQPFTDS PMNEYASSGT
YYFASGSILK KYFNTMILQE LNTNQEYYVS LAYIPMLADN CKVVVYEISH FMQWGTPEDL
AEYKMWSAAF LALISPRVRT AKHKGAVFVP MAGQGQRFLD AGYQTPKPLI PVSGKAMAIQ
AINDLPITDK QYAILRADLP YISQLILELK NNFPTMNISI LDQITDGQAR TCMSAMNNIE
VDLPLTIGAC DNGSIYDTTK FENLLSMPDT DIIVWTTKEH ALAKRKPEMF GWIESTPENK
VTRVSVKAPL NNPSEDSIII GCFTFKRAGD FSLLFESLIN RKGEMNGEYY IDSMIEDALN
IGMNVYIFDV DHYLGWGVPD DLNIFSYWQS CFHKWNTHHY CLTQDNRVPV ESQEQRFESS
PIHTYLEK
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