| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1984 |
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| Symbol | |
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| ID | 6116247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2441539 |
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| End bp | 2441865 |
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| Gene Length | 327 bp |
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| Protein Length | 108 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633487 |
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| Product | type IV pilus assembly PilZ |
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| Protein accession | YP_001760363 |
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| Protein GI | 170726337 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3215] Tfp pilus assembly protein PilZ |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.748677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0111146 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGATC TCGTTGTTAA TTTTGACACG CTACATCATC TATACCGTGC TTATATGCCT
TTTATTCAAC CTGTTGGGCT ATTTGTGTCG ACGAGTGAGA GTCATTATTT AGGTCAAGAG
TTAACTATCG CCTATCAACT GCCAGGTTCG ACCACAAAAT TAGAGTTTAA AGGCTCTGTA
GTCTGGATAA ATCCCTTAGG TGCCTCGGGT GGACGTCCGG CTGGAATAGG AGTGAAGATA
ATAACTGAGC CTGAAACCCA CAAACACCAC ATTGAGAATC TATTGTCACG GGAGCTAGCT
TCTGGGGATC AAACCTGTAC CATGTAG
|
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| Protein sequence | MTDLVVNFDT LHHLYRAYMP FIQPVGLFVS TSESHYLGQE LTIAYQLPGS TTKLEFKGSV
VWINPLGASG GRPAGIGVKI ITEPETHKHH IENLLSRELA SGDQTCTM
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