Gene Swoo_1904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1904 
Symbol 
ID6116167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2344638 
End bp2345672 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content45% 
IMG OID641633407 
Producthypothetical protein 
Protein accessionYP_001760283 
Protein GI170726257 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.962197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTACG ATCAAAATCT AGCTATACGC TATCCTAAAG GACCCTTTGC CATGTGGAGC 
GTTTACAGTT TCACAGGCGC CTCCATTCTT GCCTCCATTG TGTTTTCACT CCTGCTATTT
TTATCGATTG ATGATGATCC TTTGATGCAG TTTCTATTTG GAGGGTTGGC TATTGTCTTT
GAACTGGGTA AATTCTTCGC CTGGTATGAG GTGGGTGAGC GCCATGCCAG ACGAAACTAT
TCAGGTATGA TCTTTGCGCT GGGCTTTTAC GCTGTATTGG CGGCAATCTC TATTGGTGGC
TCGGTTGGCG GGATTAATAG CGCGACCAAT AAAGCTCAGA GTCATGTCGC TTTGCATCAG
AGTAAGGTCA ATGCATTTGA TATGCAGATA GCTGCCATCG ATAAGCAGAT AGCACTTAAT
AATGTTGCTG CTGAGAAATA CATTCAGATG GAGCGAATAG CCACAGGTGT AGTGAGAATA
CAGAATGAGA ATAAACGGCT CAGAGAGGAG CAGCAAAAGT TAGCGGTGCA GAGAGACAGC
CTACCGCTTG CTGAACAAGG CTCTGTGGTT GGACTGATTG ATAGTTTGGC ATCCTTTTTA
CATACATCGC CCCATACTGC TCAGTTAGGG CTGGTGGTGT TTCTCTCAAT ACTGTTGGAT
TTCTTTGCCG CTTTCTTCGT TGGTTTGATC GGTGAGGAGA ATCGCTTTCG TCATCAATAT
CGTCATATGA AACCAATTAC CATAGATAGC TTCACCTCAG GTGAGATGAA AGAGCCAGAG
ATGTTGAGCC ACTTCACACC CACAATCAAC AGTGAGTTTG ATGGCACAGC TTGCAATGAA
CCCAATAAAA CTGCTTATGA GAGGGTGATA GAGGCCTTGA GTACCCAGCA GGTGATGTGC
AGTAAACGTG CAGTAATAAC ACAGCTAAAA CTCAAGCCTG ATGAGGTGGA TGTTATCTTT
ACTCAGCTCT TTAATGAGGG CATTGTTAGC AAAAAAGCCA ACAACCACTT TCAGTGGCAT
GGATTGCAAG GCTGA
 
Protein sequence
MFYDQNLAIR YPKGPFAMWS VYSFTGASIL ASIVFSLLLF LSIDDDPLMQ FLFGGLAIVF 
ELGKFFAWYE VGERHARRNY SGMIFALGFY AVLAAISIGG SVGGINSATN KAQSHVALHQ
SKVNAFDMQI AAIDKQIALN NVAAEKYIQM ERIATGVVRI QNENKRLREE QQKLAVQRDS
LPLAEQGSVV GLIDSLASFL HTSPHTAQLG LVVFLSILLD FFAAFFVGLI GEENRFRHQY
RHMKPITIDS FTSGEMKEPE MLSHFTPTIN SEFDGTACNE PNKTAYERVI EALSTQQVMC
SKRAVITQLK LKPDEVDVIF TQLFNEGIVS KKANNHFQWH GLQG