| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1883 |
|---|
| Symbol | |
|---|
| ID | 6116146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 2326139 |
|---|
| End bp | 2326495 |
|---|
| Gene Length | 357 bp |
|---|
| Protein Length | 118 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641633386 |
|---|
| Product | histidine triad (HIT) protein |
|---|
| Protein accession | YP_001760262 |
|---|
| Protein GI | 170726236 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.601656 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.179498 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGAAG AAACCATTTT CAGTAAAATT ATACGTCGAG AGATCCCTGC TGATATCTTA
TTCCAAGATG AATTAGTCAC CGCATTTCGT GATATTAATG CCCAGGCGCC GAGCCATATT
CTTATCATTC CCAATCATCT TATTCCAACA GTGAATGATG TCAAAGCATC AGATGAGAAA
GCACTGGGAC GTATGATGAC CGTTGCCGCT AAATTGGCGG AGGAGGAGGG AATAGCTGAG
GATGGGTACC GTCTTATTAT GAATTGCAAT AAACATGGGG GACAGGAGGT TTATCATATT
CATATGCATC TTGTAGGCGG TAGGCCTCTA GGCCGAATGT TAGCAGCTAA GAAATAG
|
|---|
| Protein sequence | MAEETIFSKI IRREIPADIL FQDELVTAFR DINAQAPSHI LIIPNHLIPT VNDVKASDEK
ALGRMMTVAA KLAEEEGIAE DGYRLIMNCN KHGGQEVYHI HMHLVGGRPL GRMLAAKK
|
|---|
| |