Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1841 |
Symbol | |
ID | 6116104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 2277376 |
End bp | 2279019 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641633344 |
Product | ferredoxin-dependent glutamate synthase |
Protein accession | YP_001760220 |
Protein GI | 170726194 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0069] Glutamate synthase domain 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000190158 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0323179 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTATAA TGCAAATGGT TTATTGGCTA GTTGCCACAT TAGGTAACCT ATCAGCACTC TACATATTAA AGCTTGAGAT GAATGTTATC TCTAGTCTGC TATTACTGTT TACCTTAGGT TATACTGCTG TTGGCTTTTA CGATATTAAA TTCAGCCCAC ACACCTTAAA TCGTCTCTAC CCTGTCGTCG CTTACCTGCG TTACTTTCTG GAATCCTATC GCGTTGAGAT CCAGCAATAC TTTATTGCAA ATGACACCGA AGAGAAGCCT TTTAACCGCG AACAGCGTTC TCTTGTTTAC CAAAGAGCAA AAAATGCTCG TGACACTATC GCATTTGGCA CCCAGCGAGA TTTAATGGAG GAGAATTACT TAAGTCTGTG GCACTCCCTC TCTCCTAAAG AGATTAAAGA TGATGTAAAA CGTGTACGTT TTGGTGGACC TGACTGCACT CAGCCATATG ATGCCTCCTA CCTAAATATC TCAGCCATGA GCTTTGGCTC GCTCAGTGCT AATGCCATTG AAGCGATGAA CTTAGGCGCT AAGTTAGCTG GCTGTTACCA TAATACGGGT GAAGGTGGAG CGAGTCCTTA CCACCTTAAG CATGGTGGCG ATGTAGTGTG GCAGGTTGGC TCAGGCCTCT TTGGTTGCAG GGATGATGAG GGGAACTTTA ACCCCGATAC ATTTAAAGCG ATGGCAACTC GGCCTCAAAT AAAAATGATT GAGATTAAGC TGAGCCAAGG TGCAAAGCCT GGCCACGGTG GCGTACTTCC TAAAGCTAAA ATCACCGAAG AGATTGCAGC GATCAGACAC GTTCCCAGAG ACAGAGATTG TGTTTCTCCT GCCGTTAACC CTGAATGCAC CACTCCAATA GCACTACTGA ACTTTGTAAA AAGGTTAAGG GAACTCAGTG GCGGAAAGCC CGTGGGCTTT AAGCTTTGTA TTGGCAACCC AGCTGAGTTT CTAGGCATAT GTAAAGCGAT GCTAGCAACA GGAATAACCC CAGATTTCAT CACTGTTGAT GGTGCTGAAG GTGGAACAGG TGCAGCCCCC GTGGAGTTTA CCAATCGCTT AGGTATGGCA TGCTTAGAGG GAGTTTATTT CGTCCATAAT GCACTCATAG GTGTTGGATT AAGGGATAAA ATTCGTATTA TTGCCTCGGG GAAAACCGCA TCAAGTTTTG ATCTACTGTC TAAAATAGCC TTAGGCGCAG ATACGGTTAA TGCGGCGCGA ACTATGATGA TGGCACTTGG GTGTATTCAA TCACGCCACT GCAACACTAA TCATTGCCCA ACAGGTATTG CAACTCAAGA CCCTGCCCGT TCAAAAGCCT TAAATGTTCA CGATAAGAGC TTAAGGGTTA AGAACTTCCA CCATAATACC TTAAAGAGTT TTTTTGAACT TGTTGGCAGC ATGGGGTTAA GCGATCCCAC CTCTTTGACC CCTCAGATGA TAAAACGCCG CTCACCTTAC GGACTGCTCA TGTCTACGGG AAGCTTAATT GAGCCATTGG AAAATGAAGC ATTAATTGAA AATAGATGTG ATGATGCATG GTCGAACTGG TGGGAAAGCT GCAGTGCAGA ACAGTTTTAT GTAGAAGATC ATTATATTCT AAAGCCTGCA GAGTTTAAAG TCGCAACACA TTAA
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Protein sequence | MTIMQMVYWL VATLGNLSAL YILKLEMNVI SSLLLLFTLG YTAVGFYDIK FSPHTLNRLY PVVAYLRYFL ESYRVEIQQY FIANDTEEKP FNREQRSLVY QRAKNARDTI AFGTQRDLME ENYLSLWHSL SPKEIKDDVK RVRFGGPDCT QPYDASYLNI SAMSFGSLSA NAIEAMNLGA KLAGCYHNTG EGGASPYHLK HGGDVVWQVG SGLFGCRDDE GNFNPDTFKA MATRPQIKMI EIKLSQGAKP GHGGVLPKAK ITEEIAAIRH VPRDRDCVSP AVNPECTTPI ALLNFVKRLR ELSGGKPVGF KLCIGNPAEF LGICKAMLAT GITPDFITVD GAEGGTGAAP VEFTNRLGMA CLEGVYFVHN ALIGVGLRDK IRIIASGKTA SSFDLLSKIA LGADTVNAAR TMMMALGCIQ SRHCNTNHCP TGIATQDPAR SKALNVHDKS LRVKNFHHNT LKSFFELVGS MGLSDPTSLT PQMIKRRSPY GLLMSTGSLI EPLENEALIE NRCDDAWSNW WESCSAEQFY VEDHYILKPA EFKVATH
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