Gene Swoo_1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1808 
Symbol 
ID6116071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2236417 
End bp2236956 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content38% 
IMG OID641633311 
Producthypothetical protein 
Protein accessionYP_001760187 
Protein GI170726161 
COG category[R] General function prediction only 
COG ID[COG3150] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0130778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0374625 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTCT ATTTACATGG CTTCGATGCA ACCAGCCCTG GTAACCATGA GAAAATACGT 
CAATTGCAGT TTATTGATAA AGACGTACGT CTACTGAGTT ATAGCACTTT ACACCCAAAG
CATGACATGC AGCATCTACT TAATGAAGTG AGTAAACAGC TGAAGTTAAC AGATGATTCC
GAACCTATCA TTATTGGTGT CGGTTTAGGT GGGTATTGGG CCGAACGGAT TGGTTATTTA
AATGGTTTAA AATCTGTATT GATTAACCCT AATTTAACAC CGCAAGATAA TATGTTGGGT
AAGATAGATA GACCGGAAGA ATACTCGGAT ATTGCAAATA AGTGTGTGTC AGAGTTTAGA
GAAAAGAACA GTGGTAAGTC TTTAGTTATA CTTTCACGCA ATGATGATAC ATTTGATAAC
CAAGTCGTGA GTGATGAATT AAGCCGCTTT TATGAAATAT GTTGGGATGA GGAGCAACCT
CATAAATTCC CAGTGTTAGC GAGCCAACTG CCAAGGATCC AAGCATTTAA AAAGGGATGA
 
Protein sequence
MILYLHGFDA TSPGNHEKIR QLQFIDKDVR LLSYSTLHPK HDMQHLLNEV SKQLKLTDDS 
EPIIIGVGLG GYWAERIGYL NGLKSVLINP NLTPQDNMLG KIDRPEEYSD IANKCVSEFR
EKNSGKSLVI LSRNDDTFDN QVVSDELSRF YEICWDEEQP HKFPVLASQL PRIQAFKKG