Gene Swoo_1791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1791 
Symbol 
ID6116054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2212204 
End bp2212572 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content41% 
IMG OID641633294 
Producthypothetical protein 
Protein accessionYP_001760170 
Protein GI170726144 
COG category[S] Function unknown 
COG ID[COG2832] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.379134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000106844 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTTTAA AGCGTGGCTT TTATCTTATT TGTGGCTTGT GTAGCTTATT TTTAGGTTTA 
TTGGGGATCC CGCTGCCCAT ATTGCCAACC GTACCATTTA TCCTGTTAGC GGCATTCTGT
TTTGCACGTT CGAGCGAGCG TTTACATCTA TGGTTAATGA ATCACCCTTG GTTTTCAGAG
GCGCTAAATG ACTGGGATGA AAAACGGGCT ATACGAAAAG GCTTAAAGAG AAAGGCATAC
ATTGTCAGTG GCTTAAGTTT TGCTGTTAGC ATTACTATTG TCCCTATAAT TTGGGTGAAG
GTGATTCTTT TATGTTTTGC GATTGGATTG GGGTTGTACC TTAGGCAGAT CCCTGAATTA
GAGGATTAA
 
Protein sequence
MVLKRGFYLI CGLCSLFLGL LGIPLPILPT VPFILLAAFC FARSSERLHL WLMNHPWFSE 
ALNDWDEKRA IRKGLKRKAY IVSGLSFAVS ITIVPIIWVK VILLCFAIGL GLYLRQIPEL
ED