Gene Swoo_1787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1787 
Symbol 
ID6116050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2209611 
End bp2210042 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content47% 
IMG OID641633290 
Producthypothetical protein 
Protein accessionYP_001760166 
Protein GI170726140 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000888061 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATTTAG TTAAAAAAAC AGTTGTTGCT GCTGCTTTAG GTACTGTTGT TGTCGGTTCA 
GCTTTTGCTG CGGAAGCGCA AGCAAATCCA TTTGGTTATA GCCAAATGGA GTCAGGTTAC
CAGCTTGTTG ACGGTGAAGG AAAATGTGGC GAAGGTAAAT GTGGTGGCGA CAAGAAAAAG
GCCAAAGAGG GAAAATGTGG CGAAGGTAAG TGTGGCGGCG ACATGAAGAA AGCCAAAGAG
GGAAAATGTG GCGAAGGTAA GTGTGGCGGC GACATGAAGA AGGCCAAAGA GGGTAAATGT
GGTGAAGGCA AGTGTGGCGG CGACATGAAG AAAGCCAAAG AGGGTAAATG TGGTGAAGGC
AAGTGTGGCG GCGATAAAAA GAAAGGTAAA GAAGGTAAGT GTGGAGAAGG CAAATGTGGT
GGCAGTAAGT AA
 
Protein sequence
MNLVKKTVVA AALGTVVVGS AFAAEAQANP FGYSQMESGY QLVDGEGKCG EGKCGGDKKK 
AKEGKCGEGK CGGDMKKAKE GKCGEGKCGG DMKKAKEGKC GEGKCGGDMK KAKEGKCGEG
KCGGDKKKGK EGKCGEGKCG GSK