| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1786 |
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| Symbol | |
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| ID | 6116049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2208266 |
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| End bp | 2209213 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633289 |
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| Product | dihydrouridine synthase DuS |
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| Protein accession | YP_001760165 |
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| Protein GI | 170726139 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000927227 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTGTAA TACTTGCTCC AATGGAAGGC GTTGCCGATG CTCCAATGCG TTCACTGCTT
ACTAGCGTTG GCGGTTATGA TCTTGTTATT AGCGAATTTA TTCGAGTTGT GGATCAGCTA
TTACCTGAAA AAGTCTTTTA TCGCTTATGT GCAGAATTAG CCTATGGTAG TAAAACCAAA
GCTGGAACCC CGGTTAGATT ACAGCTACTG GGTCAACACC CAAATTGGAT GGCTGAAAAC
GCCATAAGAG CTATCGAGCT TGGCTCACTC GGCGTTGACC TCAATTACGG TTGCCCAGCC
CCCATGGTTA ACAGAAGCAA TGGTGGCGCT GCTTTACTTA AAGAACCTGA AACTATCTAT
AAAGTCACTA AAGCCGTAAG AGAGGCAGTG CCTTCATCAC ACCCAGTTTC GGCCAAAATC
AGATTAGGCT GGGATGATAA AAGCCGTTGC GTAGAGATAG CTCAAGCTAT TGAATCAGCT
GGTGCTACCG AACTCACTGT ACATGCTAGA ACCAAAGAGG AGGGTTACCG CCCTCCGGCC
CATTGGGAAT ATATCAATTT AATAAGGGAA GCGATTGCTA TCCCAGTCAT CGCTAATGGT
GAAGTATGGT GTCATCAAGA TTATTTAAAA TGTCAGGCTG CCAGTGGATG CGATGACGTC
ATGATAGGAC GGGGGGCGTT AGCGGTTCCC AATTTAGCCC ATGTCATCAA AACCAACCAA
GTTAAGATGC CCTGGAACCA AGTGATGCAG TTATTAGTGC AATATTCTGA ATATGAAATT
GTCAGCGTCA AAGAGAAGTA TTACCCAGCT AGAATCAAAC AGTGGTTGAA ATTTATGGTG
AAACAATACC CACAGGCCGA CACCCTATTT GCACAAGTGC GCGTGATGAA ACAAACTCAA
GAGATCCTCG CCCTGTTAAG AAGTGAAGCA GAGAATCAAT ACCTATAG
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| Protein sequence | MRVILAPMEG VADAPMRSLL TSVGGYDLVI SEFIRVVDQL LPEKVFYRLC AELAYGSKTK
AGTPVRLQLL GQHPNWMAEN AIRAIELGSL GVDLNYGCPA PMVNRSNGGA ALLKEPETIY
KVTKAVREAV PSSHPVSAKI RLGWDDKSRC VEIAQAIESA GATELTVHAR TKEEGYRPPA
HWEYINLIRE AIAIPVIANG EVWCHQDYLK CQAASGCDDV MIGRGALAVP NLAHVIKTNQ
VKMPWNQVMQ LLVQYSEYEI VSVKEKYYPA RIKQWLKFMV KQYPQADTLF AQVRVMKQTQ
EILALLRSEA ENQYL
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