| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1683 |
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| Symbol | |
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| ID | 6115924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2091171 |
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| End bp | 2092262 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641633165 |
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| Product | dTDP-glucose 4,6-dehydratase |
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| Protein accession | YP_001760063 |
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| Protein GI | 170726037 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
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| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.429769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAAAA CCATATTGGT GACAGGTGGG GCTGGTTTTA TTGGAGCGGC GCTCATTCGT
TTTTTAATTA ATGAAACTGA TAATAGGGTT ATTAACTTAG ACAAACTAAC CTATGCTGGT
AACCTGCTTT CACTTAAAGA TATTGAAGGG GATGAGCGTT ATCATTTTAT TCATGGTGAT
ATCTGCGACA AAACTCTGGT CTGTCAAACG TTAAAGCATT TTCAACCTGA CTTTATTATG
AACTTAGCGG CAGAGAGTCA TGTTGACCGC TCCATAGAGG GTCCGTCTGC ATTTATTGAA
ACCAATATCT TAGGAACCTT TAGCTTGCTG GAAGCGGCAA GAAGCTATTG TTTAACTTTA
TCAGATGAAA AACGTCATGG TTTTCGATTC CATCATATCT CTACCGATGA GGTGTATGGT
GAATTAGGAG ATACAGGGTA TTTCACAGAA GAGAGTCCTT ACTTGCCCAG TTCGCCATAC
TCGGCGAGTA AGGCTGCATC TGATCACTTA GTGCGAGCAT GGAGCCGGAC CTATAACCTT
CCTGTTGTAT TAACGAACTG CTCTAATAAC TATGGTGCCT ATCAGTATCC AGAAAAGCTT
ATCCCCTTAG TGATAATGAA TGCGTTGAGT GGCAAGCCTA TCCCTATATA TGGTGACGGT
AAGCAGATTA GAGACTGGCT GTATGTCGAT GACCATGTTC GTGCTCTATA TTGTGTTGTG
ACAAAAGGAG AGGTGGGTGA GACTTATAAT ATTGGCGGGT GTAATGAAAA AACTAATTTG
GAGGTGGTTA CCGCTATTTG TGAACTGCTT GAAGAGTTGG CTCTAACTAA CGCCTATTCC
AGTAATGAAA TAGATGGAGG GTTTTCGAGT TTAATCACCT ATGTAACTGA TAGACCTGGT
CATGATACTC GTTATGCTAT CGATGCTGGG AAAATAGCAC GGGAGTTAAA TTGGCAGCCA
ATGGAGTCTT TTAATTCAGG TTTGAGAAAA ACGGTTATCT GGTATTTAGA AAATCAAGCC
TGGTGCCAAT CGATTCTATC TAAACCTCAA AACAAACCAT TTTCACAAAA TAAGCCATCT
GAAGCTGATT GA
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| Protein sequence | MSKTILVTGG AGFIGAALIR FLINETDNRV INLDKLTYAG NLLSLKDIEG DERYHFIHGD
ICDKTLVCQT LKHFQPDFIM NLAAESHVDR SIEGPSAFIE TNILGTFSLL EAARSYCLTL
SDEKRHGFRF HHISTDEVYG ELGDTGYFTE ESPYLPSSPY SASKAASDHL VRAWSRTYNL
PVVLTNCSNN YGAYQYPEKL IPLVIMNALS GKPIPIYGDG KQIRDWLYVD DHVRALYCVV
TKGEVGETYN IGGCNEKTNL EVVTAICELL EELALTNAYS SNEIDGGFSS LITYVTDRPG
HDTRYAIDAG KIARELNWQP MESFNSGLRK TVIWYLENQA WCQSILSKPQ NKPFSQNKPS
EAD
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