Gene Swoo_1673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1673 
Symbol 
ID6115914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2069513 
End bp2070745 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content34% 
IMG OID641633155 
Productmembrane bound O-acyl transferase MBOAT family protein 
Protein accessionYP_001760053 
Protein GI170726027 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1696] Predicted membrane protein involved in D-alanine export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGAGA AGGAAAGTAA GTCAGCGCGA AAGCCTTATC TATGGTTAAG CTTAATGGTT 
AATTTAGGTA TATTATTCGT GTTTAAATAT TGGAACTTTT TTGGTTATAG TCTTAGTAGT
TTATTGAGTG TGAATTTAGA ACTTCACAAC CTACTACTCC CTTTAGGCTT GTCTTTCTAC
ACATTACAAA CATTAAGCTA TATTTTCGAT GTTTATTTAG GGAAGATCAA ACCTGAAAGG
CACTTAGGTC TTTTTTGCCT GTATGTCAGC TTTTTTCCTC AATTGGTAGC TGGTCCAATT
GAGCGAAGCA GAACATTATT ACCCCAACTG AAATCCTTGG AATTGCCTAC TCTTTATCAA
TTTCGTTATG GTTTACTACT CATTGTCTGG GGCTTTTTTA TTAAGCTTGT TATTGCTGAT
AATTTAAGTG CTAGCATTAA TTCGGTTTAC TTTGGTAAAG AATACTTTCC CTTTTGGGTT
TATTGGTTCA TAGGTGCGTT GGTAACGCTA AAAATTTATT GTGACTTTAT GGCCTATTCT
GAGATCGCAC GTGGTGTAGG GATGCTGTTT GGCGTTAAAC TTACGTTAAA TTTTAGAAGG
CCTTTATTCG CAACTAACCT TAGATCTTTT TGGCAACGTT GGCATATTAG TCTAACTCGT
TGGATTGGAG ATTATATTCA AATTCCTCTT CTAAGACGTT ATCCTACTCA ACCTCACCGC
TCAGTTGTAA CGATTATGAC CTTGGTTATT ATTGGTTTTT GGCATAGTGC TAGCTGGAAT
TTTATTCTTT TTGGTTTGTT TCATGGCATG GTTATGGTGA TATGGAGTCC AATAGCTAAA
AATATCAGTA TATTATTCGA AGGCAGTTTT GCCTTCTCAA GTATCTTTGG TAGGTTTTTC
TTAGCCATTG TTTTAATGTC TAGTGCGCCG ATGTTTTATA TTCAAGATAC TTCAATATTG
TTTAATATAC TTAAAAATAT GTTGTTATTT GATTTATTTG AACCTACTCA AATATCAAGC
ATTCATGGAA AGGTTATGTT GATTAAGGCT CTTTTCGGAT TTATTTTATT ATTTTTATAT
AGTTTTTTCA ATGAGTTTAA GCAGCAAGAT TTCATAGTTA ATTTAGCTAG GTCGTCATCT
AATAGACGTT GGTGTGAAAT GTTGTTTATT GTCTTTAGTA CGTTGTTTTT AGGGAGTTTC
GTTCATGAGC CATTCATCTA TTTTGAATTT TAG
 
Protein sequence
MGEKESKSAR KPYLWLSLMV NLGILFVFKY WNFFGYSLSS LLSVNLELHN LLLPLGLSFY 
TLQTLSYIFD VYLGKIKPER HLGLFCLYVS FFPQLVAGPI ERSRTLLPQL KSLELPTLYQ
FRYGLLLIVW GFFIKLVIAD NLSASINSVY FGKEYFPFWV YWFIGALVTL KIYCDFMAYS
EIARGVGMLF GVKLTLNFRR PLFATNLRSF WQRWHISLTR WIGDYIQIPL LRRYPTQPHR
SVVTIMTLVI IGFWHSASWN FILFGLFHGM VMVIWSPIAK NISILFEGSF AFSSIFGRFF
LAIVLMSSAP MFYIQDTSIL FNILKNMLLF DLFEPTQISS IHGKVMLIKA LFGFILLFLY
SFFNEFKQQD FIVNLARSSS NRRWCEMLFI VFSTLFLGSF VHEPFIYFEF