| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1647 |
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| Symbol | |
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| ID | 6115888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2038488 |
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| End bp | 2039336 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641633130 |
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| Product | VacJ family lipoprotein |
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| Protein accession | YP_001760028 |
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| Protein GI | 170726002 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00736521 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTTA ACAGGATAAT GCTAATTGTA GCATCGTTGA TCATTTCCCC CATTGCGGTA
TCAGGACAGG ATGTCCTAGT AAAGCATGTT TATAAGGAAG AGGTTCATCA AGAGAGAGCA
TCATTAGATG GTGGGGTCAA TCTTGACATC GAGCCGGAGA CTTCACCGAC TGTAACTATC
TCATATAATG ATCCTAGGGA TCCGATAGAA GGCTTTAACC GGGCTATGTG GGATTTTAAT
TACCATGTAA TGGATCGGTA TCTGTATCGC CCCGTTTCTC ATGGGTATAA GGATTACATT
CCATTACCTG TTAAAACCGG CGTAAATAAT TTTGTGACTA ATCTTGAAGA GCCCAGTACA
CTGGTTAATA ACACCCTACA GGGAAAGTGG AGCTGGGCAG CTAATGCTGG AGGAAGGTTC
ACGATTAACA CCACTATGGG TTTGCTTGGT GTGATTGATG TTGCAGGTAT GATGGGGCTG
CCACGTAAAC AAGATGAGTT TAATGAAGTG CTAGGTTACT ACGGTGTTCC GAATGGTCCC
TATTTTATGG CTCCTTTTTT AGGGCCTTAT GTAACCAGAG AACTCGCATC GGATTGGGTT
GATGGCCTAT ACTTTCCATT ATCTGAGTTT ACAATCTGGC AGTCTTTACT TAAGTGGGGT
CTTAAAAGTC TTCACCAACG TGCAGAAGCG ATTGATCAAG AGAGATTGGT AGATAATGCT
CTGGATCCTT ATACTTTCGT TAAAGAAGCT TATTTTCAAC ATATGGACTA TAAGGTGTAT
GATGGAGATG TACCTGTAGA TTTAAGTGAA GATGAGCTTC TGGATGAGTA TCTTGATGAA
CTAGATTAA
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| Protein sequence | MKLNRIMLIV ASLIISPIAV SGQDVLVKHV YKEEVHQERA SLDGGVNLDI EPETSPTVTI
SYNDPRDPIE GFNRAMWDFN YHVMDRYLYR PVSHGYKDYI PLPVKTGVNN FVTNLEEPST
LVNNTLQGKW SWAANAGGRF TINTTMGLLG VIDVAGMMGL PRKQDEFNEV LGYYGVPNGP
YFMAPFLGPY VTRELASDWV DGLYFPLSEF TIWQSLLKWG LKSLHQRAEA IDQERLVDNA
LDPYTFVKEA YFQHMDYKVY DGDVPVDLSE DELLDEYLDE LD
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