| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1628 |
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| Symbol | fliP |
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| ID | 6115869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2019394 |
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| End bp | 2020140 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641633111 |
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| Product | flagellar biosynthesis protein FliP |
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| Protein accession | YP_001760009 |
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| Protein GI | 170725983 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
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| TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCGAT TGTTGCTATT AATTACCTTC ACTTTACTGC TTTTTTCTCC TGATATTTTT
GCACAGGATG GCATATTACC TGCGGTGACA GTTTCAACTG GCGCCGATGG CGATACTCAA
TATTCGGTCA CAATGCAGAT ATTGCTGTTG ATGACGGCAC TGAGCTTCCT GCCTGCCATG
CTCATTATGT TGACATCGTT TACACGCATT ATCATTGTTT TATCAATTCT TCGCCAAGCA
ATTGGTTTAC AGCAAACTCC CTCTAATCAA GTCTTGATTG GTATGAGTAT GTTTCTTACT
TTTTTCATCA TGTCACCGGT TTTTGACAAG GTTTATGATA GCGCGGTGAA GCCTTACATG
AATGAAAGTA TGAATATAGA GCAGGCGTTT CATGTTGGAA AAGAGCCAAT TAAAGAGTTT
ATGTTGGCAC AAACTCGTGT GACAGATCTG GAAACCTTCG TAGAGATCTC TGGTTATCAA
AACATTAATT CAGTAGATGA AGCTCCCATG AGTGTCATCA TTCCGGCGTT TATCACCAGT
GAGTTAAAAA CAGCCTTTCA GATCGGATTT ATGCTATTTG TCCCATTTTT GGTGCTCGAC
CTTGTGGTCG CCAGTATTTT GATGGCCATG GGTATGATGA TGCTCTCTCC TATGATTGTC
TCTTTGCCCT TTAAAATCAT GCTGTTTGTA CTTGTCGATG GCTGGAGCTT GGTTATGGGT
ACCTTGGCGA ATAGTTTTGG GACTTAG
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| Protein sequence | MNRLLLLITF TLLLFSPDIF AQDGILPAVT VSTGADGDTQ YSVTMQILLL MTALSFLPAM
LIMLTSFTRI IIVLSILRQA IGLQQTPSNQ VLIGMSMFLT FFIMSPVFDK VYDSAVKPYM
NESMNIEQAF HVGKEPIKEF MLAQTRVTDL ETFVEISGYQ NINSVDEAPM SVIIPAFITS
ELKTAFQIGF MLFVPFLVLD LVVASILMAM GMMMLSPMIV SLPFKIMLFV LVDGWSLVMG
TLANSFGT
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