Gene Swoo_1590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1590 
Symbol 
ID6115831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1983287 
End bp1983913 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content47% 
IMG OID641633073 
Producthypothetical protein 
Protein accessionYP_001759971 
Protein GI170725945 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACCC TACAGCTTGT TTTATTTACA TTACTCCTTA GCGGGTGTGC TCAGCAGGTA 
CACACTACCA AGTCACCGCT TGCCGACGGC AATCGGTTGC CGTCAACGTC GGCCATTAAT
CATGTTTCAC AGCAGATTGC GAACGAGTTG GTAAGGCAAA ATGATGCTTT ACGTGCTAAT
CAACCTTTGC TGGTTGCTAC ACCTGTTTTA CTCGCTGATT TAAATCAGAC CAATGCTGTA
GGGCTTCAGC TCCAGGAGGG GTTAACTGCA GCAATGCACG ATCATCAATT TAGTTTGGTC
GATATCAATG TGGGCGAGAA TATTCGTGTC ACCCCTCAGG GGGATTTTTT ATTGACGCGA
AACTGGAAGC AACTGCCAAC CGGTATTGCT GTTGAGCATG TATTGGTGTC GACCATGAGC
ATGAGCAGCG AAGGGATGGT GATTAATGCC AGAGTCGTTA ATATTACCAA TAATCGTGTT
GTCTCAGCCT CACAAGCGAG TTTTGGACTT GAGCAGTTAC CAGGATATTT AAGGGCGTCA
GAACAGGTGG TCTCTCAAGA TGGATTACTT TACCGAGACA GTGGCATGGG AGAGAAAGAG
GTGAGAGTGA TTGGAGGTTT GAAATGA
 
Protein sequence
MRTLQLVLFT LLLSGCAQQV HTTKSPLADG NRLPSTSAIN HVSQQIANEL VRQNDALRAN 
QPLLVATPVL LADLNQTNAV GLQLQEGLTA AMHDHQFSLV DINVGENIRV TPQGDFLLTR
NWKQLPTGIA VEHVLVSTMS MSSEGMVINA RVVNITNNRV VSASQASFGL EQLPGYLRAS
EQVVSQDGLL YRDSGMGEKE VRVIGGLK