Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1569 |
Symbol | |
ID | 6115809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1957834 |
End bp | 1960914 |
Gene Length | 3081 bp |
Protein Length | 1026 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641633051 |
Product | acriflavin resistance protein |
Protein accession | YP_001759950 |
Protein GI | 170725924 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAGG CTTTTGTCGA AAACGGTAGG CTGGCAAGTC TGTTCATTGC CTTGCTGATA GTGGCAGGTT TTGGCGCTAT ATCTAGTTTG CCTCGCATGG AAGATCCCGA TATAACCAAC CGCTTCTCAT CAGTGATCAC TCACTATCCC GGTGCCTCAG CCGAGCGTGT CGAAGCTTTG GTAACCGAAG TACTCGAAAA CCAGCTTCGC CGACTCGAAG AGATAAAGCT GGTTCAGTCC ACCTCAAGAC CTGGTATTTC GGTCATTCAG CTGGAACTTA AAGATGAGGT TATCGATACC GATCCAGTGT GGTCAAGAGC CAGAGATCTG GTTGCAGATG CCAAATCACT CCTACCCTCA GCCGCACTTA GCCCTACTTT AGACGATCAG ATAGGCTATG CCAGCACAGC GATTTTAGGA CTTGTGTGGC AAGGAGGTGG AGAGGTCCGC ACCGACATGC TTAACCGCTA CGCCAAGGAG TTACAGAGCC GCTTGCGTTT GGTTAGCGGT ACAGATTTCG TGACCCTCTA TGGTGCCCCA ACAGAAGAGA TCTTAGTCGA ACTCGATGGC AATAAAGCCA ACCAACTCAA GCTTACTCCT GCCGCGATTG CCCAAATCCT TGAAAATGCA GACACTAAAG TTTCCGCAGG AGAGATAAAT AACAACAACT TTCGCGCACT TATCGAAGTC TCTGGTGAGC TCGATTCTGT CACCCGCGTT CGTCAAGTGC CATTGAAAGT CGATGAGCTA GGGCAGATCA TTCGCTTAGG CGATATTGCA GCCATTAAAA GACAAGCTAA AACTCCGGCC AACTCCATCG CACTCATAGA GCAGGAGCAA GGGGTCATGG TCTCGGCTCG AATGCTAAAC AATACCCGTG TTGACCTCTG GCTAGAGAGA GTCAGAGCAT CAGTCGATGA GCTACAAACG AGCATTCCTG CCAATATTGA GATCCAGTGG CTATTTGATC AAGAGGGATA CACCACTGAG CGACTCGGCG GTTTAGTTGG CAGCCTTTTA CTTGGTTTTA TCATCATCTT AGTCGTATTA ATGTTAACCC TTGGACTACG CAATGCACTG ATTGTCTCCC TCTCTCTACC ATTAACAGCC CTGTTCACCT TAGCCTGCAT GAAATACATC GGCCTACCGA TCCATCAGAT GTCAGTCACA GGTTTAGTGG TAGCACTGGG GATCATGGTT GATAATGCCA TTGTTATCGT CGATGCTATT GCTCAGAGAA GACAGCAAGG CTTATCAAGA CTAGAGGCGG TCAGTAAAAC ACTGCATCAC CTCTGGCTTC CCCTTGCAGG TTCAACCATC ACCACCATGC TGGCATTTGC ACCTATCGTC TTGATGCCAG GCGCTGCTGG AGAGTTTGTT GGCGGTATCG CTATCTCAGT CATGTTTGCA CTAGTGGGCT CTTACGTTAT CTCCCACACA TTAATTGCTG GCCTTGCAGG CCGATTTGGT GTGAGTGGCA GCGAGCAGCA GTGGTATCAA AGAGGGATCT CCCTTCCCTT CGTCAGTCAG TTATTTCATA CAACTCTCAT CATAGCGCTA AAACGCCCTA TTATCTCTGC ACTGTTGATT GGTATTATTC CAGTGCTCGG ATTTATCGCA GCTGGCAAGA TGACAGAGCA GTTCTTTCCC CCTTCAGACA GAGATATGTT TCAGATAGAG GTTTACCTGC CTCCCCACGC CAGTGTAAAT AGCACCCGAG CTTATATCGA AAAAATGGAC TCCCACCTAC GCACAACCGA TGGAATTACC CGAATCGACT GGGTTGTTGG CGGTAATACC CCCTCTTTCT ACTACAACCT TTTGCAGCGT CAGCAAGGTG CCAGTAATTA TGCCCAAGCT ATGGTGAAAG TCACTGACTT TGCCACCGCA AATGCGTTGA TCCCTAAGCT TCAACAAAAC TTAGACTCAA GCTTCCCTGC TGCGCAAGTT TTAGTGCGAA AACTGGAACA AGGCCCACCA TTCAACGCCC CTGTAGAATT AAGAGTATTT GGCCCTAACC TAGATCAATT AAGGGTGATA GGCGACGAAG TCAGGCGGGT TTTAAGCAAC ACTCCGGATG TTATTCACAC TCGAGCAACC CTTAGTGCTG GTGCCCCTAA GGTGTGGTTT CAGATCAATG AAGATGCCAG TTTAATGAGC GGGTTAAACC TTACCGATAT CGCTAAGCAG ATCCAGATGG CGACCACAGG GATCAATGGA GGCAGCTTAC TTGAGCAAAC AGAGTCTCTT CCCATCAGGG TAAGGTTACA AGACAGCACT CGCGAGCAAC AAACCAAGCT GTCAGAGATA AATCTCGTCT CCCCTTCTGG TACAGGTATT CCACTCTCGG CACTGGCCAG TGATAAAATA GAGGTGAGCA GAGGAGCGAT TCCACGAAGG GATGGCCAGA GAGTCAACAC CATAGAGGCC TACATTGTCA GCGGCGTTCT GCCACAGCAG GTACTGGACG ATGCCAAAGT GCGCATTGAT GCGATATCAC TGCCCGCAGG TTACCGTATT GAGGTCGGTG GTGAAAGTGC CAAGCGCAAT GAGGCTGTGG GTAATTTACT GTCAAATGTC GTACTTGTGG TCACGCTGCT TCTGGCAACC GTTGTGCTCT CATTTAATTC GTTCAGGTTA ACGGCCATTA TTCTCTTTAG CGCCCTTCAA TCTGCGGGAC TTGGGTTACT CGCCGTCTAT CTGTTTGGCT ACCCTTTTGG ATTTACCGTA ATTATCGGCT TACTAGGTCT AATGGGGCTT GCCATTAATG CTGCCATTGT TATCTTGGCG GAGCTTGAAG ATCAAGATGA CGCAAGAGGA GGAAATATCT CAAACGTGGT CAGTGCGGTT TCAAGTTGTG GCCGTCATAT TGGCTCAACC ACCATTACCA CCATAGGCGG CTTTTTGCCG CTGATCATAG CTGGTGGCGG TTTCTGGCCA CCTTTCGCCA TCGCGATTGC TGGTGGGACA CTGTTAACAA CTTTACTCTC TCTTGTTTGG GTTCCCACCA TGTATCAACT GTTTATGACA CCAAAAAAAC GCTGTACCAA CCTAACGAAA CAGCTCCCCT TAGAGAACTA G
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Protein sequence | MIKAFVENGR LASLFIALLI VAGFGAISSL PRMEDPDITN RFSSVITHYP GASAERVEAL VTEVLENQLR RLEEIKLVQS TSRPGISVIQ LELKDEVIDT DPVWSRARDL VADAKSLLPS AALSPTLDDQ IGYASTAILG LVWQGGGEVR TDMLNRYAKE LQSRLRLVSG TDFVTLYGAP TEEILVELDG NKANQLKLTP AAIAQILENA DTKVSAGEIN NNNFRALIEV SGELDSVTRV RQVPLKVDEL GQIIRLGDIA AIKRQAKTPA NSIALIEQEQ GVMVSARMLN NTRVDLWLER VRASVDELQT SIPANIEIQW LFDQEGYTTE RLGGLVGSLL LGFIIILVVL MLTLGLRNAL IVSLSLPLTA LFTLACMKYI GLPIHQMSVT GLVVALGIMV DNAIVIVDAI AQRRQQGLSR LEAVSKTLHH LWLPLAGSTI TTMLAFAPIV LMPGAAGEFV GGIAISVMFA LVGSYVISHT LIAGLAGRFG VSGSEQQWYQ RGISLPFVSQ LFHTTLIIAL KRPIISALLI GIIPVLGFIA AGKMTEQFFP PSDRDMFQIE VYLPPHASVN STRAYIEKMD SHLRTTDGIT RIDWVVGGNT PSFYYNLLQR QQGASNYAQA MVKVTDFATA NALIPKLQQN LDSSFPAAQV LVRKLEQGPP FNAPVELRVF GPNLDQLRVI GDEVRRVLSN TPDVIHTRAT LSAGAPKVWF QINEDASLMS GLNLTDIAKQ IQMATTGING GSLLEQTESL PIRVRLQDST REQQTKLSEI NLVSPSGTGI PLSALASDKI EVSRGAIPRR DGQRVNTIEA YIVSGVLPQQ VLDDAKVRID AISLPAGYRI EVGGESAKRN EAVGNLLSNV VLVVTLLLAT VVLSFNSFRL TAIILFSALQ SAGLGLLAVY LFGYPFGFTV IIGLLGLMGL AINAAIVILA ELEDQDDARG GNISNVVSAV SSCGRHIGST TITTIGGFLP LIIAGGGFWP PFAIAIAGGT LLTTLLSLVW VPTMYQLFMT PKKRCTNLTK QLPLEN
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