Gene Swoo_1522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1522 
Symbol 
ID6115762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1897553 
End bp1897885 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content42% 
IMG OID641633006 
Producthypothetical protein 
Protein accessionYP_001759905 
Protein GI170725879 
COG category[S] Function unknown 
COG ID[COG2914] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.43135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00455736 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATATAG AGCAAGAGAA TTTTTCAGTT GAAGTGATCT ATGCTTTGCC TACTCAGCAA 
AAACGAGTTC AGGTTAAAGT GGCACCGGGG ACGACCTGTA TTGAAGCTGT TGAGCTGAGC
GAGATGGTTA ATTTTTTTCC GGAAATTGAT CTTGAAAAGG TAAAACTTGG GATTTTTAGT
CGCTTGGTGA AACATTCGGA AGTATTGGTT CCTGGACAGA GAGTAGAAAT TTACCGGCCC
TTGATAGCCG ACCCTAAAGA TGTACGTCGT AAGCGAGCTG AAAAAGCGAA AGATGAAGGG
CGGATCAACA AGATCACAGG TGCAAAGATT TAA
 
Protein sequence
MNIEQENFSV EVIYALPTQQ KRVQVKVAPG TTCIEAVELS EMVNFFPEID LEKVKLGIFS 
RLVKHSEVLV PGQRVEIYRP LIADPKDVRR KRAEKAKDEG RINKITGAKI