| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1422 |
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| Symbol | |
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| ID | 6115662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1790102 |
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| End bp | 1792372 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641632910 |
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| Product | PfaB family protein |
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| Protein accession | YP_001759809 |
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| Protein GI | 170725783 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | [TIGR02816] PfaB family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCAGC TGACAGCTAA CGCGAGCGTC AGTGAGCAAG TTATCAAGAG TGAGATGCCC
CTGCGCATCG CACTCTTGGT GCTGCCTGCC TCACTAGATT TAAGCAAGAG TGTAGATGCT
GCATCTGAGC AGGCTGAACA ACTTTGTGTG TTAATGCCTG AGCTATACAG CTCAAAATTG
CTAGAGACAA CAGAGCTTGT CTCTATCAAG GTCGATGATT TTGAAGCGAA CTTAACAGCC
ACTATCGAAT CGATAGAGCA AGGTAAGATA GTACAGATCT CAACGCCATC TAGCTCACTG
TTGATGATGC ATGCACTCAA GGCGGCGCAA AATCGAATTC ACCCCCATGC GCAGCTTGCT
GCGATGCAGA TACAAGAGCA CTTAGATCCA TCAACCTCTA TGGCTAAGGC CCTAAACCAA
GCAAAGCGCA AACCTGACAG CGTCAGCAAG CGCTTTGATC TGCCAGAGCT TAATAGCACT
GAGCAGTTTG ATGCGGTATG TAAGCTCATC CAAGATCTTG CTTCTCGCAC ACACCATAGA
GATCCACAGT CAATCGGTCC TAAACAGGCC AATAGCCACT ACTGGTTTAC CAGCCACCAT
CAAGCACGCG TGGTGGCCAT TAACCTAACA AATAGCGTCA AGGGGCAAAG CGACAGTGCC
CACAGCGATG ATAATAGTGC CCACAGCCCA AGCGAATGCG TTAACAATCA GAGCTGCATC
AGCTTCGTGC TCTCCCAAGG CACAGGCTTT ACCGCACCAA AATCGATTAT CAATACTAAG
CGGTTACAAC TTGTTGTCTC AGCAAATAGC CAAGTGGAAC TCATTAATTC ACTAGGCGCG
CTGAGAACTC AGTTGCTAGC AGCCTCAACT CCTGAATCGC TACTTAATTT GATGCGTGAT
AACCTGCTTG CCTTCGAAGC AAGCACAAAC TACGAACTGG TTATCGCACT ACAAGCAACG
TCAGTTGAAG CCATGCTTCA AGAGCTTGAT GCCATGGCTG AGAAACTACC AAGTGTAATA
AGTGAGAATG GTCAGTATCG TACGCCAGCA GGTAGCTACT TTACCGCTAA GCCTTTAGGG
GCACCGGCTC AAAATGGCCT TGCCTTTGTC TACCCTGGAG TGAGGACGGT TTATAGCGAT
ATGTTCAGTG AATTGCATGG ATACTTCCCG TCACTCTACG CTCAACTTGA GCGTGAGGGA
GACTTGAAGT CTATGTTCCA AGCCGACAGC ATCTATCACT TAGACCCAAA AGTGGCACCA
GCCATGGCCT TAGGTGATCT GGCTATTGCT GGTGTAGGTA GCAGCTACCT ACTGACTCAA
CTGCTGGTTA AAGAGTTTAC TATCACACCC AACTTTGCCT TAGGTTACTC CATGGGTGAG
GCGTCGATGT GGGCCAGTCT TGGCGTGTGG AAAGAGCCAC ATACCTTGAT TGAAAAAACC
AAAACTGACC CGCTATTTAC CAGCGCGATC TCAGGCAAAC TAACAGCGGT TCGTAAGGCT
TGGCAGCTTG ATAATAACGA TGCAGATATT GTCTGGAACA GCTTTGTTGT TCGATCGCCA
GCAGCGCCCA TTGAAGCGCT ATTACCTGAG TTCCCCCACG CTTACCTCGC CATTATTCAG
GGTGATACCT GTGTGATTGC TGGTTGTGAG ACTCAGTGTC GAGAGCTGCT CGCTAAGTTG
AAAAAACGAG GCATTGCTGC AAACCGCGTC ACGGCAATGC ACACAGCTCC AGCGATGGAG
GAGCATGGCA ATGTAGAGCA GTTCTACAAT CAGCCTCTGC AAGATTCACT GCCTATTGAT
ATCAAGTTTA TCAGTGCAGC ATCGGCTGAT AGCACTGTAT CTAATGCTCA AGGTAAAATA
GACTCTCAGG TTGTCGCCCG CTCCATCGCC GATACCTTCT GCAATACCTT AGACTTTACA
GCCCTTATTC ATAGTGCACA AAAGCAAGGC GCTAAGCTGT TTGTCGAACT TGGCGCAGAT
AGACAAAACT GCACCCTTAT CGACAAAATC GCTAAACAGG ATCGTCAATG CGGGAGTGAG
TCTACTGACT ACCCTTGCAG CACGGTGCCA GTTAATGCCA AAGGCGGTGA TGATATCACC
ACCCTACTTA AGGCATTAGG CCAACTCATC AGTCACCGAG TACCTCTTAC TGTCGCGCCT
TTGATCAATG GATTAAATCG TGAGATAGCC CTGTCACAAC TACAGGCTAC ACACACGGTT
CAGCTCAAGA GTAAACAGAT GTCGAATCTA ACTTTACAAG GAGAAGTCTA A
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| Protein sequence | MDQLTANASV SEQVIKSEMP LRIALLVLPA SLDLSKSVDA ASEQAEQLCV LMPELYSSKL
LETTELVSIK VDDFEANLTA TIESIEQGKI VQISTPSSSL LMMHALKAAQ NRIHPHAQLA
AMQIQEHLDP STSMAKALNQ AKRKPDSVSK RFDLPELNST EQFDAVCKLI QDLASRTHHR
DPQSIGPKQA NSHYWFTSHH QARVVAINLT NSVKGQSDSA HSDDNSAHSP SECVNNQSCI
SFVLSQGTGF TAPKSIINTK RLQLVVSANS QVELINSLGA LRTQLLAAST PESLLNLMRD
NLLAFEASTN YELVIALQAT SVEAMLQELD AMAEKLPSVI SENGQYRTPA GSYFTAKPLG
APAQNGLAFV YPGVRTVYSD MFSELHGYFP SLYAQLEREG DLKSMFQADS IYHLDPKVAP
AMALGDLAIA GVGSSYLLTQ LLVKEFTITP NFALGYSMGE ASMWASLGVW KEPHTLIEKT
KTDPLFTSAI SGKLTAVRKA WQLDNNDADI VWNSFVVRSP AAPIEALLPE FPHAYLAIIQ
GDTCVIAGCE TQCRELLAKL KKRGIAANRV TAMHTAPAME EHGNVEQFYN QPLQDSLPID
IKFISAASAD STVSNAQGKI DSQVVARSIA DTFCNTLDFT ALIHSAQKQG AKLFVELGAD
RQNCTLIDKI AKQDRQCGSE STDYPCSTVP VNAKGGDDIT TLLKALGQLI SHRVPLTVAP
LINGLNREIA LSQLQATHTV QLKSKQMSNL TLQGEV
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