| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1396 |
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| Symbol | |
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| ID | 6115636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1754628 |
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| End bp | 1755248 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641632884 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_001759783 |
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| Protein GI | 170725757 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.76085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATACT TGATCGCTGT GATGCTTTTT GCCATCTCAT CTTCAGTGAC TCCAGGGCCT
AATAACATTT TAGTGATGAC CTCAGGGGTA AACTTTGGCA TTAAAAAAAG TTTGCCTTTG
CTCAGCGGGA TCTGTGTTGG TTTTACAGTC ATGTTACTCT TGGTTGGCTT TGGGTTTGCA
CAACTGTTTG AGCTATTTCC ACAGCTACAC TTCATCATAA GATGCATAGG CACTCTTTAT
CTGCTCTATT TAGCATGGCT CATTGCAAAG TCAGCTGGGG TAATGGATAC CAATACAACC
AACTCTCAAC CTAAACCACT CTCATTTATG AAAGGCGCAC TGTTTCAGTG GGTCAATGCA
AAAGCTTGGG TCGTTTCTAC AGGGGCTATT GCGGCATTCA CCACTCTTGA GTCAAACTTC
TATAGTCAAA ACTTGACCAT AGCGCTGACC TTTCTTTTGG TCTCTTTTCC CTGTGTTGGG
ATCTGGTTAT TGTTTGGCTC TATGCTAAAA AAGCTACTCA AGAGCGAACA AAATATGAGG
TGGTTTAACT ATTCAATGTC TGGGTTACTG GTTTTGTCTG TGGTACCAGT TATCAACGAA
ATAATCATTC AACTTAGTTA A
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| Protein sequence | MEYLIAVMLF AISSSVTPGP NNILVMTSGV NFGIKKSLPL LSGICVGFTV MLLLVGFGFA
QLFELFPQLH FIIRCIGTLY LLYLAWLIAK SAGVMDTNTT NSQPKPLSFM KGALFQWVNA
KAWVVSTGAI AAFTTLESNF YSQNLTIALT FLLVSFPCVG IWLLFGSMLK KLLKSEQNMR
WFNYSMSGLL VLSVVPVINE IIIQLS
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